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Why Small Decisions Define the SHAPE of Modern Research Data Processing", "language": "eng", "type": "Poster", "subtype": "poster", "authors": [ { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" } ], "contributors": [], "date": "2026-10-20", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.23493248", "conceptDOI": "10.5281/zenodo.23127196", "version": "0.9.11", "keywords": [ "data", "framework", "data processing", "ROOT" ], "description": "Research data rarely go straight from an instrument into a publication. Cleaning, converting, combining, analysing, plotting and writing up are where results take shape, but also where undocumented decisions, ambiguous handovers and manual interventions can make them difficult to trace or repeat. SHAPE introduces five principles for making this processing work explicit, understandable and open to checking: Structure Stages: Define each activity's purpose, inputs, outputs and responsibilities, and make dependencies between stages visible. Harmonize Handovers: Agree on names, formats and meanings so that the next person or tool can interpret and use an output correctly. Automate Actions: Turn recurring actions into executable procedures, recording the settings and decisions needed to run them again. Propagate Provenance: Keep results connected to their inputs, actions, decisions and contributors, and carry that history forward. Evaluate Explicitly: Define acceptance criteria, check inputs and outputs, and review failures and assumptions throughout the work. The five principles apply throughout a workflow; they are not a fixed sequence of steps. Activities such as collecting, cleaning, comparing, combining and collaborating can each involve all five. Adapt the activities to your workflow and revisit the principles whenever inputs, methods, responsibilities or intended uses change. SHAPE complements the FAIR Guiding Principles for findable, accessible, interoperable and reusable research objects and ROOT , which emphasises Robust, Open, Ongoing and Time-tested tools. SHAPE focuses on how processing work is organised so that others, and your future self, can understand, repeat and check it. It condenses established practical advice, such as the ten simple rules for reproducible computational research , good enough practices in scientific computing and The Turing Way , into five questions, and speaks of provenance in the terms of W3C PROV . Each principle acts in its own place: inside each stage, between stages, on every rerun, along the chain and at every checkpoint. SHAPE's nearest neighbours are the FAIR Principles applied to computational workflows and workflow management systems such as Snakemake . They make the automated part of the work findable, reusable and rerunnable. SHAPE also covers the manual steps and handovers around it, and asks whether the work is correct and repeatable: quality and reproducibility, which the FAIR workflow recommendations name as beyond their scope. This deposit contains two complementary A0 portrait posters and a one-page self-check: Framework overview: Introduces the five principles through the problems they prevent, an overview of how they act together in one workflow between FAIR and ROOT, and a card per principle with its guiding question, an abstract diagram, an explanation, practical actions and a line in practice, without relying on a particular discipline or dataset. Workflow example: Applies SHAPE to the creation of the posters themselves. It maps the five principles across authoring, tangling, generation, compilation, checking and packaging, with excerpts from the actual source and build history. Self-check: One A4 page that rates a workflow on the five questions. Level 0 is the problem a principle prevents; levels 1 to 3 are written down, automated and checked. Rating again later shows what changed. Both posters are generated from one Org-mode source using Emacs/Org, Make and LuaLaTeX. The accompanying source bundle includes the source, build instructions, assets, validation results and checksums needed to inspect and rebuild the posters. Each PDF embeds a build-history snapshot captured at compilation; the completed history, including later checking and packaging, is recorded in the repository. The shared release version is 0.9.11 . References Wilkinson, M. D. et al. (2016). The FAIR Guiding Principles for scientific data management and stewardship. Scientific Data, 3, 160018. doi:10.1038/sdata.2016.18 . Bossert, L. C. (2026). Resilient Technologies. Why Decades-Old Tools Define the ROOT of Modern Research Data Management. Version 1.1.0. Zenodo. doi:10.5281/zenodo.19051651 . Sandve, G. K., Nekrutenko, A., Taylor, J. and Hovig, E. (2013). Ten Simple Rules for Reproducible Computational Research. PLOS Computational Biology, 9(10), e1003285. doi:10.1371/journal.pcbi.1003285 . Wilson, G., Bryan, J., Cranston, K., Kitzes, J., Nederbragt, L. and Teal, T. K. (2017). Good enough practices in scientific computing. PLOS Computational Biology, 13(6), e1005510. doi:10.1371/journal.pcbi.1005510 . Goble, C., Cohen-Boulakia, S., Soiland-Reyes, S., Garijo, D., Gil, Y., Crusoe, M. R., Peters, K. and Schober, D. (2020). FAIR Computational Workflows. Data Intelligence, 2(1–2), 108–121. doi:10.1162/dint_a_00033 . Wilkinson, S. R., Aloqalaa, M., Belhajjame, K. et al. (2025). Applying the FAIR Principles to computational workflows. Scientific Data, 12, 328. doi:10.1038/s41597-025-04451-9 . The Turing Way Community (2025). The Turing Way: A handbook for reproducible, ethical and collaborative research. Zenodo. doi:10.5281/zenodo.3233853 . Mölder, F., Jablonski, K. P., Letcher, B. et al. (2021). Sustainable data analysis with Snakemake. F1000Research, 10, 33. doi:10.12688/f1000research.29032.2 . Lebo, T., Sahoo, S. and McGuinness, D. (eds.) (2013). PROV-O: The PROV Ontology. 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Im Anhang des Dokuments befindet sich außerdem ein Skript für eine Coscine Live-Demonstration, die z.B. im Rahmen von Präsentationen oder Workshops durchgeführt werden kann. In Version 2 wurde der Link zu den GitLab Community Features angepasst, da eine Migration von git.rwth zu git.nrw stattgefunden hat. Darüber hinaus wurde im Skript für eine Coscine-Demonstration die Beschreibung zur Einstellung der Metadatensichtbarkeit in Coscine-Projekten und -ressourcen (Public oder Project Members) konkretisiert. Seit Mitte 2026 können die über Coscine veröffentlichten Metadaten nicht nur über die interne Coscine Suche, sondern auch über einen öffentlichen Wissensgraphen abgerufen werden. Dafür steht in Kürze ein SPARQL Endpunkt zur Verfügung, über den Nutzende die Metadaten selbstständig abfragen können.", "originalKeywords": [ "Coscine", "Coscine.nrw", "DataStorage.nrw", "RDM", "FAIR", "DH.NRW" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/23334852", "versionsURL": "https://zenodo.org/api/records/23334852/versions", "historyURL": "https://zenodo.org/records/18628439", "materials": [ { "name": "de_Beratungsleitfaden_Coscine_DataStorage.nrw.pdf", "url": "https://zenodo.org/api/records/23334852/files/de_Beratungsleitfaden_Coscine_DataStorage.nrw.pdf/content", "checksum": "md5:d38e8a20a9a879fc625bf3ed6bfb6621" }, { "name": "V2_de_Beratungsleitfaden_Coscine_DataStorage.nrw.pdf", "url": "https://zenodo.org/api/records/23334852/files/V2_de_Beratungsleitfaden_Coscine_DataStorage.nrw.pdf/content", "checksum": "md5:ccfdf1b5a00d7205ccd29386733f6da7" }, { "name": "eng_Consultation_Guideline_Coscine_DataStorage.nrw.pdf", "url": "https://zenodo.org/api/records/23334852/files/eng_Consultation_Guideline_Coscine_DataStorage.nrw.pdf/content", "checksum": "md5:17bf4c807e343e056592e53d175f7f9d" }, { "name": "V2_eng_Consultation_Guideline_Coscine_DataStorage.nrw.pdf", "url": "https://zenodo.org/api/records/23334852/files/V2_eng_Consultation_Guideline_Coscine_DataStorage.nrw.pdf/content", "checksum": "md5:031449ad4fe3e746b9de7f3bf998752d" } ], "relations": [ { "identifier": "10.5281/zenodo.18267532", "relation": "isSupplementedBy", "resource_type": "publication", "scheme": "doi" }, { "identifier": "10.5281/zenodo.18267868", "relation": "isSupplementedBy", "resource_type": "publication", "scheme": "doi" }, { "identifier": "10.5281/zenodo.18183047", "relation": "isSupplementedBy", "resource_type": "publication", "scheme": "doi" } ], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/23334852", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:7f0bf6f8fd784eb5fa", "topic:keyword:26a0f42d7665772ad6", "topic:keyword:08aab2424db3bd47d9", "topic:rdm", "topic:open-science", "topic:keyword:ada9c5116bc3f24eb0", "topic:metadata", "topic:semantic-query" ], "currentRelease": null, "year": "2026", "citation": "Jansen, Katja; Lang, Ilona; Robrecht, Michèle; Grünwald, Katharina M. E.; Bossert, Lukas C.; Politze, Marius; Werger, Michael; Stöver, Ben. 2026-10-13. Leitfaden für Beratungsgespräche zu Coscine & Speicherplatzanträgen. https://doi.org/10.5281/zenodo.23334852", "bibtex": "@misc{work-zenodo-18628439,\n title = {Leitfaden für Beratungsgespräche zu Coscine \\& Speicherplatzanträgen},\n author = {Jansen, Katja and Lang, Ilona and Robrecht, Michèle and Grünwald, Katharina M. 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Das FDM:Storage.nrw Bewirtschaftungskonzept richtet sich in erster Linie an Personen, die FDM-Landesbasisdienste betreiben und Speicherplatz vom FDM:Storage.nrw bereitstellen möchten. Das Bewirtschaftungskonzept erläutert die Rahmenbedingungen für die Speicherplatzvergabe durch Landesbasisdienste, wie z.B. ein wissenschaftsgeleitetes Vergabeverfahren zur Zuteilung von Speicherplatz. Die mögliche Speicherdauer wird klar definiert, ebenso wie die unterstützten Forschungsinitiativen, zu denen sowohl Forschungsprojekte als auch Datenpools gehören. Das Konzept behandelt auch Verfahren zur Datenrettung wertvoller Datensätze sowie die Ermöglichung kooperativer Nutzung zwischen verschiedenen Einrichtungen. Ein weiterer wichtiger Aspekt ist die Einhaltung der FAIR-Prinzipien, um die Nachnutzbarkeit von Daten sicherzustellen. Zudem müssen FDM-Landesbasisdienste eine Selection Policy veröffentlichen, in der ihre Auswahlkriterien dargelegt sind. Transparente Reportingzahlen über die Nutzung müssen regelmäßig übermittelt werden. 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The accompanying exercises address practical RDM skills such as file organization, naming conventions, version control, backups, responsible data sharing, and literate programming, including the ROOT principles for resilient digital technologies.", "originalKeywords": [], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/23263901", "versionsURL": "https://zenodo.org/api/records/23263901/versions", "historyURL": "https://zenodo.org/records/23263900", "materials": [ { "name": "NFDI4ING - Fiona Summer School - 2026-08 - 14-Carrer-Landscape.pdf", "url": "https://zenodo.org/api/records/23263901/files/NFDI4ING%20-%20Fiona%20Summer%20School%20-%202026-08%20-%2014-Carrer-Landscape.pdf/content", "checksum": "md5:9f79c393a18c2497ee11a33dc9b11302" } ], "relations": [], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/23263901", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:rdm", "topic:learning" ], "currentRelease": null, "year": "2026", "citation": "Bossert, Lukas C.. 2026-10-09. 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RDM Career Paths and FAIR4Studium},\n author = {Bossert, Lukas C.},\n year = {2026},\n date = {2026-10-09},\n doi = {10.5281/zenodo.23263901},\n url = {https://doi.org/10.5281/zenodo.23263901},\n version = {1},\n note = {Presentation}\n}\n", "preview": { "url": "/research/previews/23263900.jpg", "source": "https://zenodo.org/records/23263901", "derivedFrom": "https://zenodo.org/api/iiif/record:23263901:NFDI4ING%20-%20Fiona%20Summer%20School%20-%202026-08%20-%2014-Carrer-Landscape.pdf/full/%5E750,/0/default.jpg", "recordId": "23263901", "license": "cc-by-4.0", "method": "Zenodo IIIF first-page thumbnail", "retrievedAt": "2026-11-08T21:12:15.180Z" }, "pageURL": "/knowledge/works/zenodo-23263900/", "contentFile": "content/knowledge/works/zenodo-23263900.md" }, { "id": "work:zenodo:22967792", "family": "22967792", "recordId": "22983324", "title": "Titanic Passengers and Crew: Demographics and Survival Data", "language": "eng", "type": "Dataset", "subtype": "dataset", "authors": [ { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" } ], "contributors": [], "date": "2026-09-26", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.22983324", "conceptDOI": "10.5281/zenodo.22967792", "version": "1.0.1", "keywords": [ "titanic", "training data set" ], "description": "This dataset provides five comma-separated files for exploring Titanic survival: individual records for 2,207 people , outcome counts by passenger class or crew membership and sex, and survival summaries using three-year age bands . It is intended for teaching, descriptive analysis, and data visualisation. Files and format titanic.csv : 2,207 person-level records, with five columns. titanic_by_class.csv : four passenger-class/crew groups, with four columns. titanic_by_sex.csv : four passenger-class/crew groups with separate counts by sex, with seven columns. titanic_by_age_and_class.csv : 100 three-year age-band/class combinations, with five columns. titanic_by_age.csv : 25 three-year age groups, with three columns. All five files use UTF-8 encoding, comma separators, one header row, and LF line endings. Decimal values use a full stop. Row counts exclude the header. NA marks unknown ages and undefined percentages in empty age/class cells; NaN is used for an empty age-only group's percentage. Neither marker means zero. The accompanying SHA256SUMS file contains a SHA-256 checksum for each of the five CSV files. Person-level data: titanic.csv class : passenger class or crew membership; values are 1st , 2nd , 3rd , and Crew . sex : sex as recorded in the source; female or male . age : reported age in years at the sinking, including fractional infant ages. Two records have an unknown age, represented by NA . survived : survival outcome; 1 means survived and 0 means did not survive. embarked : embarkation location; B = Belfast, C = Cherbourg, Q = Queenstown, and S = Southampton. The file contains 1,317 passengers and 890 crew members: 324 first-class, 284 second-class, and 709 third-class passengers. There are 711 survivors and 1,496 people who did not survive. Recorded sex counts are 489 female and 1,718 male. The four source crew categories are combined into Crew , and the source field gender is named sex in this export. Names and identifiers are omitted. Identical rows are retained because different people can share the same five attributes. Ages have not been imputed or grouped in this file; the other columns contain no missing values. Rows are sorted by class ( 1st , 2nd , 3rd , Crew ), sex ( female , male ), numeric age ascending, survival outcome ( 0 , 1 ), and embarkation code alphabetically. Missing ages follow known ages within each class/sex group. Outcomes by class and crew: titanic_by_class.csv Class : passenger class or crew membership; rows are ordered 1st , 2nd , 3rd , Crew . Aboard : number of people in the group. Survived : number of survivors in the group. Died : number who did not survive, calculated as Aboard - Survived . Both sexes and all ages are included, including the two people with unknown ages. Counts sum to 2,207 aboard, 711 survived, and 1,496 died. Each row satisfies Aboard = Survived + Died . Crew is a separate group, not a fourth passenger class. Outcomes by class and sex: titanic_by_sex.csv Class : the same four ordered class/crew groups. Women aboard , Women survived , Women died : counts for records with sex = female . Men aboard , Men survived , Men died : counts for records with sex = male . The column labels “Women” and “Men” refer to the recorded sex categories and include children. Unknown ages are retained. For each class/crew group, adding the corresponding female and male counts reproduces titanic_by_class.csv . Counts cover all 2,207 people; a missing class/sex combination would be represented by zero counts. Age and class summary: titanic_by_age_and_class.csv age_midpoint : integer age-band label, taking the values 1, 4, 7, …, 73 . class_code : 1 = first class, 2 = second class, 3 = third class, and 4 = crew. survival_pct : 100 × survivors / n , rounded to six decimal places; NA when the group is empty. n : number of people with known age in the group. survivors : number of survivors in the group. The summary crosses 25 age bands with four class/crew categories. Bands are [0,3) , [3,6) , …, [72,75) : each includes its lower bound and excludes its upper bound. Both sexes are pooled. The two people with unknown ages are excluded, leaving 2,205 people and 711 survivors . Despite its name, age_midpoint contains the middle completed-year age, rather than the exact midpoint of the continuous interval. For example, label 1 represents ages 0–2, including fractional ages below three; label 4 represents ages 3–5. No individual ages are rounded before grouping. All 100 combinations are retained, including 12 empty cells with n = 0 , survivors = 0 , and survival_pct = NA . These cells must not be interpreted as zero-percent survival. Rows are ordered by increasing age-band label and then class code. Group counts, survivor counts, and percentages have been checked against the person-level file. Age-only summary: titanic_by_age.csv Age : a completed-year age-band label: 0-2 , 3-5 , …, 72-74 . People : number of people with known age in the band. Survived % : percentage who survived, rounded to one decimal place; NaN for an empty band. This summary pools passengers and crew, all classes, and both sexes. Its 25 ordered groups use the same three-year intervals as titanic_by_age_and_class.csv , including fractional ages without rounding them first. There is no combined 60+ group. Unknown ages are excluded, and counts sum to 2,205. Within each age band, summing the four class/crew counts in the age/class summary gives People ; the survival percentage is calculated from pooled survivor and person counts, not by averaging the four class percentages. Source and preparation The preparation notes identify the direct source as the Titanic CSV in Dennis Sun’s Principles of Data Science repository , accessed on 25 September 2026. Selected fields were manually transcribed from the browser-readable CSV and exported programmatically; the person-level export was subsequently sorted as described above. The source URL refers to a mutable branch rather than a pinned revision. A related 2,207-person dataset is documented in the stablelearner reference manual . The exact transformation history linking that dataset to the educational CSV has not been independently established. This collection contains individual records and is distinct from the familiar 2,201-person Titanic contingency table. Interpretation and limitations These are descriptive data for the supplied cohort, not a definitive historical reconstruction. Reported ages may be uncertain. A complete record-by-record comparison with the upstream CSV has not been performed, so transcription errors remain possible despite internal consistency checks. The exact upstream revision, upstream licensing requirements, and any transcription correction log remain to be established. Some age/class groups contain very few people; percentages should therefore be interpreted alongside n . The summaries contain no uncertainty estimates. Class codes identify categories, and crew is not a fourth passenger class. Pooling sexes and crew roles can conceal differences within groups. The data alone do not establish causal effects of age or class on survival.", "originalKeywords": [ "titanic", "training data set" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "nlpl" }, "source": "https://zenodo.org/records/22983324", "versionsURL": "https://zenodo.org/api/records/22983324/versions", "historyURL": "https://zenodo.org/records/22967792", "materials": [ { "name": "titanic.csv", "url": "https://zenodo.org/api/records/22983324/files/titanic.csv/content", "checksum": "md5:d61754d86ae05be5e16ab7614c651a9c" }, { "name": "SHA256SUMS", "url": "https://zenodo.org/api/records/22983324/files/SHA256SUMS/content", "checksum": "md5:1e3aa8f8f6e2d1e99416eb0e6505323b" }, { "name": "titanic_by_age.csv", "url": "https://zenodo.org/api/records/22983324/files/titanic_by_age.csv/content", "checksum": "md5:9371fcafe9076182229898b5ede80ebe" }, { "name": "titanic_by_class.csv", "url": "https://zenodo.org/api/records/22983324/files/titanic_by_class.csv/content", "checksum": "md5:43b9458143cdac95008c2d289ca0798b" }, { "name": "titanic_by_age_and_class.csv", "url": "https://zenodo.org/api/records/22983324/files/titanic_by_age_and_class.csv/content", "checksum": "md5:38e599af137d6b5df80bf4794fcb7ad8" }, { "name": "titanic_by_sex.csv", "url": "https://zenodo.org/api/records/22983324/files/titanic_by_sex.csv/content", "checksum": "md5:bcbbbfe169443cd1107f080c3716aeba" } ], "relations": [], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/22983324", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:8c2a25260209b2db50", "topic:keyword:a06b5be064d47c577e", "topic:learning", "topic:keyword:d2ea7f17126491f785" ], "currentRelease": null, "year": "2026", "citation": "Bossert, Lukas C.. 2026-09-26. 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For these roles, experience in data generation and a sense of dataset ownership are essential. The German National Research Data Infrastructure for Engineering Sciences (NFDI4ING) has recently implemented an innovative summer school concept for RDM (\"Praktikum Digitalisierung\", DOI: 10.5281/zenodo.14222359). In the summer school, phyphox is used as a mobile lab that enables participants to collect, export, and analyze smartphone sensor data in reproducible, low-threshold experiments, while also engaging and motivating students in ways that support learning success.", "originalKeywords": [ "Research Data Management", "RDM", "NFDI4ING", "Summer School", "phyphox" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/22835363", "versionsURL": "https://zenodo.org/api/records/22835363/versions", "historyURL": "https://zenodo.org/records/22835362", "materials": [ { "name": "NFDI4ING Poster - Fiona Summer School 2026 - v1.0.pdf", "url": "https://zenodo.org/api/records/22835363/files/NFDI4ING%20Poster%20-%20Fiona%20Summer%20School%202026%20-%20v1.0.pdf/content", "checksum": "md5:138482a7e1594762110126ccd35debf2" } ], "relations": [], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/22835363", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:rdm", "topic:keyword:b2f932be5573517217", "topic:keyword:79dbc078ccd7245f5a", "topic:keyword:4fede9e51767aecd03", "topic:learning" ], "currentRelease": null, "year": "2026", "citation": "Moser, Mario; Demandt, Évariste; Hamann, Tobias; Bossert, Lukas C.; Kalmbach, Leon; Scholten-Strauch, Ines; Schwarz, Annett; Zinke, Wolf; Rac, Thomas; Abdelrazeq, Anas; Schmitt, Robert. 2026-09-18. 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The roundtable explored how research practices and digital infrastructures can become more resilient, accessible, and sustainable. Drawing on personal experiences with LaTeX, scholarly publishing, and research data management, Lukas C. Bossert reflects on the difficulties that technically polished work can create for collaboration and later reuse. These experiences introduce ROOT—Robust, Open, Ongoing, and Time-tested—as a way of choosing digital technologies that remain useful over time. Using building bricks as a metaphor, the text connects robustness with repairability, openness with documented formats and interfaces, ongoing development with active maintenance and community support, and longevity with a demonstrated ability to adapt. Examples including Emacs, Org mode, gnuplot, awk, Perl, and literate programming illustrate the continuing value of established tools. The central argument is that sustainable research depends on technologies and working practices that allow colleagues, future users, and our future selves to understand, reuse, and continue the work.", "originalKeywords": [ "resilient technologies", "emacs" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/22772124", "versionsURL": "https://zenodo.org/api/records/22772124/versions", "historyURL": "https://zenodo.org/records/22772123", "materials": [ { "name": "root-bricks-panel.pdf", "url": "https://zenodo.org/api/records/22772124/files/root-bricks-panel.pdf/content", "checksum": "md5:d14ad603ad4e88667ea89d0eab9278a7" }, { "name": "root-bricks-panel-standalone.html", "url": "https://zenodo.org/api/records/22772124/files/root-bricks-panel-standalone.html/content", "checksum": "md5:e5b70112e234fd9e2b7381d6cbe6711c" } ], "relations": [ { "identifier": "10.5281/zenodo.17157587", "relation": "isPartOf", "scheme": "doi" } ], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/22772124", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:fc86329f90514a0c7a", "topic:emacs" ], "currentRelease": null, "year": "2026", "citation": "Bossert, Lukas C.. 2026-09-15. ROOT — Technology That Stands the Test of Time. Version 1.0.0. https://doi.org/10.5281/zenodo.22772124", "bibtex": "@misc{work-zenodo-22772123,\n title = {ROOT — Technology That Stands the Test of Time},\n author = {Bossert, Lukas C.},\n year = {2026},\n date = {2026-09-15},\n doi = {10.5281/zenodo.22772124},\n url = {https://doi.org/10.5281/zenodo.22772124},\n version = {1.0.0},\n note = {Presentation}\n}\n", "preview": { "url": "/research/previews/22772123.jpg", "source": "https://zenodo.org/records/22772124", "derivedFrom": "https://zenodo.org/api/iiif/record:22772124:root-bricks-panel.pdf/full/%5E750,/0/default.jpg", "recordId": "22772124", "license": "cc-by-4.0", "method": "Zenodo IIIF first-page thumbnail", "retrievedAt": "2026-11-08T21:12:16.241Z" }, "pageURL": "/knowledge/works/zenodo-22772123/", "contentFile": "content/knowledge/works/zenodo-22772123.md" }, { "id": "work:zenodo:22694645", "family": "22694645", "recordId": "22694646", "title": "From Data Lake to Data Mesh. Implementing Distributed Research Data Management in CRC1382", "language": "eng", "type": "Poster", "subtype": "poster", "authors": [ { "name": "Gonzalez, Catherine", "affiliation": "RWTH Aachen University", "orcid": "0000-0002-7585-9990" }, { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" } ], "contributors": [], "date": "2026-09-10", "datePrecision": "day", "event": { "title": "Boosting Biodata Bootcamp", "acronym": "BBB", "dates": "17 September 2026", "place": "Aachen", "url": "https://events.hifis.net/event/3702/contributions/24973/" }, "doi": "10.5281/zenodo.22694646", "conceptDOI": "10.5281/zenodo.22694645", "version": "0.1.1", "keywords": [ "data mesh" ], "description": "Collaborative Research Centers (CRCs) generate large volumes of heterogeneous research data across multiple projects and disciplines. CRC1382 \"Gut-Liver Axis\" comprises 22 projects organized into three project areas (A, B, and Q), each contributing complementary perspectives on the interactions between the gut, liver, metabolism, immunity, and the microbiome. The interdisciplinary nature of this research requires data from diverse sources to be discoverable, understandable, and reusable across project boundaries. Traditional research data management often resembles a data lake, where data are centrally stored but can become difficult to govern, interpret, and reuse. To address these challenges, CRC1382 is adopting data mesh principles, a decentralized approach in which research groups retain ownership of their data while treating datasets as well-documented, reusable products. Shared standards and infrastructure ensure interoperability and reuse across the consortium. A central component of this strategy is the CRC DATAHUB, which provides a shared platform for dataset discovery, documentation, and governance while preserving project ownership. Researchers remain responsible for the scientific context and quality of their data, while metadata are centrally managed. This enables scalable research data management as projects evolve, new collaborations emerge, and consortium structures change. The Data Steward and Data Engineer support this process by maintaining the DataHub, harmonizing metadata, implementing governance standards, and facilitating data integration without taking ownership from researchers. This poster presents the motivation, design, and implementation of the CRC1382 DataHub and demonstrates how data mesh principles can be applied in a biomedical research consortium. It provides a practical model that can be adapted by other CRCs and collaborative research initiatives to strengthen research data management and FAIR data practices.", "originalKeywords": [ "data mesh" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/22694646", "versionsURL": "https://zenodo.org/api/records/22694646/versions", "historyURL": "https://zenodo.org/records/22694645", "materials": [ { "name": "data-mesh-poster_0-1-1.pdf", "url": "https://zenodo.org/api/records/22694646/files/data-mesh-poster_0-1-1.pdf/content", "checksum": "md5:29f0d31d41c6cac241d3d2afecb08486" } ], "relations": [], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/22694646", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:8f018c1b8cfc6d86cf", "topic:rdm", "topic:metadata" ], "currentRelease": null, "year": "2026", "citation": "Gonzalez, Catherine; Bossert, Lukas C.. 2026-09-10. 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The app enables easy acquisition and analysis of data using the sensors of students’ own smartphones and thereby promotes low-barrier, authentic experimentation both inside and outside traditional laboratory settings. A central feature of phyphox is the live visualization of incoming sensor data on the smartphone display, including, for example, real-time plots, derived quantities, and automated analysis routines. Students can therefore directly observe how physical processes translate into measurement signals while performing the experiment itself. This real-time monitoring of sensor data supports exploratory and self-directed experimentation because measurements remain interpretable and controllable immediately during acquisition, even before they are uploaded to a shared repository or formally embedded into a theoretical framework. Building on these possibilities, phyphox advocates a measurement-before-theory approach in its teaching materials, suggesting that students may first conduct experiments “blind,” i.e., without prior theoretical explanation, and only later derive and discuss the corresponding physics concepts from the jointly collected data (see phyphox modular online worksheets [3]). This approach is intended to strengthen exploratory learning, student agency, and the connection between empirical observation and theoretical understanding. The same educational idea has also been taken up beyond the official phyphox project itself, for example on the German higher-education platform e-teaching.org , where phyphox-based experiments are described as opportunities for students to conduct experiments before deriving the associated theory. By explicitly comparing this situation to scientific research itself (“ähnlich der Forschung”), e-teaching.org reframes incomplete theoretical understanding as a productive and motivating feature of scientific inquiry and research [4]. Here we put these ideas of exploratory—impromptu—measurement to the test by analysing data from a repetitive “swish swish” hand-wave gesture performed near the smartphone’s light sensor. The data was acquired spontaneously during a Zoom™ call on 13 February 2026 and subsequently uploaded to the sciebo repository of RWTH Aachen University [5]. We provide (i) the original phyphox dataset (“Licht 2026-02-13 13-34-38.xls”), (ii) an upsampled and annotated version thereof (“preview_resampled_annotated.xlsx”), and (iii) the lecture slides used for presentation (“Module_phyphoxSNR.pptx”). Acknowledgement: The author would like to thank the Federal Government and the Heads of Government of the Länder, as well as the Joint Science Conference (GWK), for their funding and support within the framework of the NFDI4ING consortium. Funded by the German Research Foundation (DFG) - project number 442146713. References [1] DOI: 10.1103/bwpv-z3xh [2] DOI: 10.1088/1361-6552/aac05e [3] URL: phyphox.org/de/module/ [4] URL: e-teaching.org/community/digital-learning-map/phyphox-physical-phone-experiments [5] URL: rwth-aachen.sciebo.de/login All links were accessed on the day of publication.", "originalKeywords": [], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/20641349", "versionsURL": "https://zenodo.org/api/records/20641349/versions", "historyURL": "https://zenodo.org/records/20641348", "materials": [ { "name": "Module_phyphoxSNR.pptx", "url": "https://zenodo.org/api/records/20641349/files/Module_phyphoxSNR.pptx/content", "checksum": "md5:82b04bbd16dd5a336164b0e56a6a02aa" }, { "name": "Licht 2026-02-13 13-34-38.xls", "url": "https://zenodo.org/api/records/20641349/files/Licht%202026-02-13%2013-34-38.xls/content", "checksum": "md5:0dfa25209fcedcd5b17e4a61e28d61e0" }, { "name": "preview_resampled_annotated.xlsx", "url": "https://zenodo.org/api/records/20641349/files/preview_resampled_annotated.xlsx/content", "checksum": "md5:b18041372fa68174787144bfd6055c5b" }, { "name": "readme.pdf", "url": "https://zenodo.org/api/records/20641349/files/readme.pdf/content", "checksum": "md5:6c51f7086ff9d87c11c79c7473518fa4" } ], "relations": [], "participation": "contribution", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/20641349", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:learning" ], "currentRelease": null, "year": "2026", "citation": "Demandt, Évariste. 2026-06-11. Assessing the Signal-to-Noise Ratio (SNR) of Exploratory, Self-Directed Physical Phone Experiments. https://doi.org/10.5281/zenodo.20641349", "bibtex": "@dataset{work-zenodo-20641348,\n title = {Assessing the Signal-to-Noise Ratio (SNR) of Exploratory, Self-Directed Physical Phone Experiments},\n author = {Demandt, Évariste},\n year = {2026},\n date = {2026-06-11},\n doi = {10.5281/zenodo.20641349},\n url = {https://doi.org/10.5281/zenodo.20641349},\n note = {Dataset}\n}\n", "pageURL": "/knowledge/works/zenodo-20641348/", "contentFile": "content/knowledge/works/zenodo-20641348.md" }, { "id": "work:zenodo:19131602", "family": "19131602", "recordId": "19171100", "title": "Resilient Technologies. Why Decades-Old Tools Define the ROOT of Modern Research Data Management — Workshop Documents", "language": "eng", "type": "Publication", "subtype": "softwaredocumentation", "authors": [ { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" } ], "contributors": [], "date": "2026-03-22", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.19171100", "conceptDOI": "10.5281/zenodo.19131602", "version": "1.1.0", "keywords": [ "research data management", "reproducibility", "literate programming", "org-mode", "FAIR", "command-line tools", "NFDI" ], "description": "This repository contains the instructor guide and a participant’s handout for the *Resilient Technologies* workshop — a 3-hour hands-on training on reproducible Research Data Management (RDM) using long-established command-line tools and Emacs/org-mode. Modern RDM landscapes are dominated by short-lived platforms and proprietary dependencies. In contrast, tools like curl, sed, grep, diff, make, awk, and tar have remained stable, open, and actively maintained for decades. This workshop demonstrates how these *resilient technologies* can be combined into a single, reproducible literate programming workflow — covering the complete research data life cycle from acquisition to archiving. All demos follow one running use case: the NFDI Consortia Collaboration 2025 dataset. Participants download the dataset with curl, clean it with sed, validate it with grep, audit transformations with diff, automate the pipeline with make, analyse it with awk, and archive the results with tar — each step documented as an executable org-babel source block inside a single .org file. The guide introduces the ROOT concept as a quality badge for tools that are Robust, Open, Ongoing, and Time-tested. It is written as a LaTeX document compiled with LuaLaTeX and includes for each tool: instructor tips, key points to convey, flag explanations, and hands-on participant challenges. 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Resilient Technologies. Why Decades-Old Tools Define the ROOT of Modern Research Data Management — Workshop Documents. Version 1.1.0. https://doi.org/10.5281/zenodo.19171100", "bibtex": "@misc{work-zenodo-19131602,\n title = {Resilient Technologies. Why Decades-Old Tools Define the ROOT of Modern Research Data Management — Workshop Documents},\n author = {Bossert, Lukas C.},\n year = {2026},\n date = {2026-03-22},\n doi = {10.5281/zenodo.19171100},\n url = {https://doi.org/10.5281/zenodo.19171100},\n version = {1.1.0},\n note = {Publication}\n}\n", "pageURL": "/knowledge/works/zenodo-19131602/", "contentFile": "content/knowledge/works/zenodo-19131602.md" }, { "id": "work:zenodo:17157587", "family": "17157587", "recordId": "19051651", "title": "Resilient Technologies. Why Decades-Old Tools Define the ROOT of Modern Research Data Management", "language": "eng", "type": "Poster", "subtype": "poster", "authors": [ { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" } ], "contributors": [], "date": "2026-03-16", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.19051651", "conceptDOI": "10.5281/zenodo.17157587", "version": "1.1.0", "keywords": [ "emacs", "technology", "tools", "RDM", "poster", "conference", "research data", "resilience", "research_data_management", "visualization", "nfdi", "services" ], "description": "Research data management (RDM) today is characterized by a multitude of new platforms and specialized software solutions. These innovations are undoubtedly important, but they also involve risks: short life cycles, proprietary dependencies, and limited sustainability. In contrast, there are tools that have existed for decades and have proven to be remarkably resilient. These “resilient technologies” are distinguished by longevity, openness, interoperability, and the support of active communities. Examples include Emacs (established in 1976 as a highly customizable editor), awk (1977) for efficient text and data processing, sed and grep (indispensable in pattern recognition and transformation since the 1970s), as well as perl (1987) as a flexible scripting language for data pipelines. In the field of documentation, LaTeX (1984) stands for sustainable, reproducible, and platform-independent text processing. For the automation of complex workflows, make (1976) has proven its worth, while rsync (1996) remains unrivaled as a robust tool for data backup and transfer to this day. This is complemented by curl (1997), which has enabled stable and universal data transfer over the internet for decades. This three-poster series argues that decades-old, community-maintained tools form the ROOT of sustainable research data management— R obust, O pen, O ngoing, T ime-tested. The Concept/Meta poster motivates the idea of “resilient technologies,” tracing its lineage from literate programming and the Unix philosophy to contemporary RDM/NFDI practice. It introduces the ROOT badge as a compact signal for tools that are transparent, composable, well-documented, and maintained across years. The Main poster translates the concept into practice by mapping resilient tools (e.g., Emacs/Org-babel, Make, curl/sed/awk/grep/diff, cron, tar/rsync, SQLite, LaTeX, find) onto the research data life cycle (planning, production, analysis, archiving, access, re-use). It highlights simple, inspectable patterns—small steps that chain together into pipelines you can audit, version, and rebuild long after fashions and GUIs change. The Source poster closes the loop by disclosing the full build of the posters themselves: a reproducible, text-first publication that can be re-generated from a single source using the very tools it advocates. Together, the trilogy provides a coherent “why–what–how”: a rationale for resilience, a concrete mapping to RDM tasks, and an executable artifact that embodies the approach. The intended outcome is pragmatic: lower maintenance burden, higher reproducibility, and infrastructures that improve with age. 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Roll up your sleeves: Developing and organizing the community-driven workshop FDM-Werkstatt. https://doi.org/10.5282/o-bib/6225", "bibtex": "@article{work-doi-10-5282-o-bib-6225,\n title = {Roll up your sleeves: Developing and organizing the community-driven workshop FDM-Werkstatt},\n author = {Schreyer, Lioba and Bossert, Lukas C. and Cyra-Wolf, Magdalene and Karsten-Welker, Adienne},\n year = {2026},\n date = {2026-02-07},\n doi = {10.5282/o-bib/6225},\n url = {https://doi.org/10.5282/o-bib/6225},\n note = {Publication},\n journal = {o-bib 13(1), 1–8}\n}\n", "pageURL": "/knowledge/works/doi-10-5282-o-bib-6225/", "contentFile": "content/knowledge/works/doi-10-5282-o-bib-6225.md" }, { "id": "work:zenodo:16035496", "family": "16035496", "recordId": "18267532", "title": "Begutachtungsleitlinien für Coscine DataStorage.nrw-Ressourcen - Handreichung und Erläuterung zur Begutachtung eingereichter Speicherplatzanträge", "language": "deu", "type": "Publication", "subtype": "publication", "authors": [ { "name": "Jansen, Katja", "affiliation": "RWTH Aachen University", "orcid": "0009-0005-7076-9848" }, { "name": "Lang, Ilona", "affiliation": "RWTH Aachen University", "orcid": "0000-0002-7202-5982" }, { "name": "Robrecht, Michèle", "affiliation": "RWTH Aachen University", "orcid": "0000-0002-1949-0009" }, { "name": "Grünwald, Katharina M. E.", "affiliation": "RWTH Aachen University", "orcid": "0000-0001-7550-552X" }, { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" }, { "name": "Politze, Marius", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3175-0659" }, { "name": "Koch, Katharina", "affiliation": "Hochschule für Gesundheit - University of Applied Sciences", "orcid": "0000-0002-7455-2874" }, { "name": "Schick, Elena", "affiliation": "Ruhr University Bochum", "orcid": "0000-0002-2621-4133" }, { "name": "Schramm, Andreas", "affiliation": "Ruhr University Bochum", "orcid": "0000-0002-6245-2809" }, { "name": "Werger, Michael", "affiliation": "University of Duisburg-Essen", "orcid": "0009-0001-8756-8955" }, { "name": "Nellesen, Marcel", "affiliation": "RWTH Aachen University", "orcid": "0000-0002-1830-5780" } ], "contributors": [], "date": "2026-01-19", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.18267532", "conceptDOI": "10.5281/zenodo.16035496", "version": "", "keywords": [ "Coscine", "DataStorage.nrw", "FDM", "JARDS", "Coscine.nrw", "DH.NRW" ], "description": "Coscine ( Co llaborative Sc ientific In tegration E nvironment) ist eine Forschungsdatenmanagement-Plattform, die Forschenden die Verwaltung von Forschungs(meta)daten ermöglicht. Die Plattform wird seit 2018 an der RWTH Aachen als Open-Source-Plattform gemäß der FAIR-Prinzipien (Lang et al. 2025) entwickelt und bietet Zugriff auf und die Verwaltung von Forschungsdaten eines Forschungsprojektes. Coscine wird den DH.NRW-Hochschulen als „ Software as a service“ angeboten. Im Rahmen von Coscine.nrw erfolgt zudem die Anbindung als Ressourcen-Typ und Provisionierung des DataStorage.nrw über Coscine. Die vorliegenden Begutachtungsleitlinien sollen allen Gutachtenden von Coscine-Speicherplatzanträgen für DataStorage.nrw Ressourcen als Leitfaden für die Bewertung bezüglich der genannten Kriterien dienen. Im Rahmen des Coscine.nrw-Nutzendentreffens am 29.04.2025 wurden die zu prüfenden Kriterien durch anwesendes FDM-Personal und Data Stewards aus NRW für die Vergabe von Speicherplatz diskutiert. Die Ergebnisse der Diskussionen wurden dieser Kurationsempfehlung als Begutachtungsleitlinien zugrunde gelegt, ausformuliert und erweitert. Das Dokument umfasst die Aspekte der Datenbegutachtung, die für Coscine und den DataStorage.nrw relevant sind. Zudem wird der Begutachtungsprozess (technische und wissenschaftliche Prüfung) von Speicherplatzanträgen inklusive Textbausteinen für Rückfragen an die Antragstellenden thematisiert. Die eingearbeiteten Textbausteine dienen als Hilfestellung für die Kommunikation (E-Mail oder persönliche Beratung) mit den Forschenden der Heimatorganisation und können bei Bedarf übernommen oder an konkrete Aussagen im Speicherplatzantrag angepasst werden. Die Reihenfolge der Kapitel orientiert sich an der Abfolge der Fragen innerhalb eines Speicherplatzantrags. Zum Abschluss findet sich außerdem eine Begutachtungs-Checkliste, die den Gutachtenden als Hilfestellung während der Begutachtung von Speicherplatzanträgen dienen soll. Eine detaillierte Beschreibung, wie der organisatorische Prozess für die Begutachtung von Speicherplatzanträgen durch die DH.NRW-Hochschulen geregelt ist, findet sich in der Coscine-Dokumentation . Coscine ( Co llaborative Sc ientific In tegration E nvironment) is a research data management platform that enables researchers to manage research (meta)data. The platform has been developed at RWTH Aachen University since 2018 as an open-source platform in accordance with the FAIR principles (Lang et al. 2025) and provides access to and management of research data from a research project. Coscine is offered to DH.NRW universities as “software as a service.” As part of Coscine.nrw, it also connects as a resource type and provisions DataStorage.nrw via Coscine. These review guidelines are intended to serve as a guide for all reviewers of Coscine storage space applications for DataStorage.nrw resources when evaluating the criteria mentioned above. During the Coscine.nrw user meeting on April 29, 2025, the criteria to be reviewed for the allocation of storage space were discussed by FDM staff and data stewards from North Rhine-Westphalia who were present. The results of the discussions were used as the basis for this curation recommendation in the form of review guidelines, which were then formulated and expanded upon. The document covers aspects of data review that are relevant to Coscine and DataStorage.nrw. It also addresses the review process (technical and scientific review) for storage space applications, including text modules for queries to applicants. The text modules serve as an aid for communication (e-mail or personal consultation) with researchers at the home organization and can be adopted as needed or adapted to specific statements in the storage space application. The order of the chapters is based on the sequence of questions within a storage space application. Finally, there is also an assessment checklist to assist reviewers during the assessment of storage space applications. 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E.; Bossert, Lukas C.; Politze, Marius; Koch, Katharina; Schick, Elena; Schramm, Andreas; Werger, Michael; Nellesen, Marcel. 2026-01-19. Begutachtungsleitlinien für Coscine DataStorage.nrw-Ressourcen - Handreichung und Erläuterung zur Begutachtung eingereichter Speicherplatzanträge. https://doi.org/10.5281/zenodo.18267532", "bibtex": "@misc{work-zenodo-16035496,\n title = {Begutachtungsleitlinien für Coscine DataStorage.nrw-Ressourcen - Handreichung und Erläuterung zur Begutachtung eingereichter Speicherplatzanträge},\n author = {Jansen, Katja and Lang, Ilona and Robrecht, Michèle and Grünwald, Katharina M. E. and Bossert, Lukas C. and Politze, Marius and Koch, Katharina and Schick, Elena and Schramm, Andreas and Werger, Michael and Nellesen, Marcel},\n year = {2026},\n date = {2026-01-19},\n doi = {10.5281/zenodo.18267532},\n url = {https://doi.org/10.5281/zenodo.18267532},\n note = {Publication}\n}\n", "externalReferences": [ { "identifier": "10.5281/zenodo.17342215", "relation": "isRequiredBy", "resource_type": "publication", "scheme": "doi", "url": "https://doi.org/10.5281/zenodo.17342215", "sourceVersion": "10.5281/zenodo.18267532", "title": "Bewirtschaftungskonzept der Forschungsdatenspeicherinfrastruktur der DH.NRW (FDSI.nrw)", "description": "Das Bewirtschaftungskonzept der Forschungsdatenspeicherinfrastruktur der DH.NRW (FDSI.nrw) regelt die Vergabe von FDSI.nrw Speicherplatz durch FDM-Landesbasisdienste. Die FDSI.nrw umfasst den DataStorage.nrw, einen redundanten S3-Objektspeicher, sowie das DataArchive.nrw für langfristige Speicherung archivierter Daten. Das FDSI.nrw Bewirtschaftungskonzept richtet sich in erster Linie an Personen, die FDM-Landesbasisdienste betreiben und Speicherplatz in der FDSI.nrw bereitstellen möchten. Das Bewirtschaftungskonzept erläutert die Rahmenbedingungen für die Speicherplatzvergabe durch Landesbasisdienste, wie z.B. ein wissenschaftsgeleitetes Vergabeverfahren zur Zuteilung von Speicherplatz. Die mögliche Speicherdauer wird klar definiert, ebenso wie die unterstützten Forschungsinitiativen, zu denen sowohl Forschungsprojekte als auch Datenpools gehören. Das Konzept behandelt auch Verfahren zur Datenrettung wertvoller Datensätze sowie die Ermöglichung kooperativer Nutzung zwischen verschiedenen Einrichtungen. Ein weiterer wichtiger Aspekt ist die Einhaltung der FAIR-Prinzipien, um die Nachnutzbarkeit von Daten sicherzustellen. Zudem müssen FDM-Landesbasisdienste eine Selection Policy veröffentlichen, in der ihre Auswahlkriterien dargelegt sind. Transparente Reportingzahlen über die Nutzung müssen regelmäßig übermittelt werden. Abschließend beschreibt das Konzept die Kriterien für die Akkreditierung von FDM-Landesbasisdiensten, um Qualität und Nachhaltigkeit zu gewährleisten.", "concept": false, "recordId": "17342215", "versionDOI": "10.5281/zenodo.17342215", "conceptDOI": "10.5281/zenodo.17342214", "date": "2025-10-13", "authors": [ { "name": "Lang, Ilona", "affiliation": "RWTH Aachen University", "orcid": "0000-0002-7202-5982" }, { "name": "Claus, Florian", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-4480-8952" }, { "name": "Rehwald, Stephanie", "affiliation": "Universität Duisburg-Essen Universitätsbibliothek Duisburg-Essen", "orcid": "0000-0002-5884-4471" }, { "name": "Cyra-Wolf, Magdalene Alice", "affiliation": "fdm.nrw - Landesinitiative für Forschungsdatenmanagement in NRW", "orcid": "0000-0001-7738-2703" }, { "name": "Jansen, Katja", "affiliation": "RWTH Aachen University", "orcid": "0009-0005-7076-9848" }, { "name": "Willems, Florian", "affiliation": "Tektonix - Gesellschaft für digitale Nachhaltigkeit mbH", "orcid": "0000-0003-0531-8432" }, { "name": "Werger, Michael", "affiliation": null, "orcid": "0009-0001-8756-8955" }, { "name": "Eifert, Thomas", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-1996-0944" }, { "name": "Politze, Marius", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3175-0659" } ], "metadataSource": "https://zenodo.org/api/records/17342215", "retrievedAt": "2026-11-09T07:41:36.037Z" } ], "pageURL": "/knowledge/works/zenodo-16035496/", "contentFile": "content/knowledge/works/zenodo-16035496.md" }, { "id": "work:zenodo:17366430", "family": "17366430", "recordId": "18267868", "title": "Coscine Selection Policy - Kriterien für die Bewilligung von DataStorage.nrw Speicherplatzanträgen über Coscine", "language": "eng", "type": "Publication", "subtype": "publication", "authors": [ { "name": "Jansen, Katja", "affiliation": "RWTH Aachen University", "orcid": "0009-0005-7076-9848" }, { "name": "Lang, Ilona", "affiliation": "RWTH Aachen University", "orcid": "0000-0002-7202-5982" }, { "name": "Robrecht, Michèle", "affiliation": "RWTH Aachen University", "orcid": "0000-0002-1949-0009" }, { "name": "Grünwald, Katharina M. E.", "affiliation": "RWTH Aachen University", "orcid": "0000-0001-7550-552X" }, { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" }, { "name": "Nellesen, Marcel", "affiliation": "RWTH Aachen University", "orcid": "0000-0002-1830-5780" }, { "name": "Politze, Marius", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3175-0659" } ], "contributors": [], "date": "2026-01-19", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.18267868", "conceptDOI": "10.5281/zenodo.17366430", "version": "", "keywords": [ "Coscine", "JARDS", "DataStorage.nrw", "DH.NRW", "Speicherplatz", "Speicherplatzantrag", "TRUST-Prinzipien", "FAIR-Prinzipien" ], "description": "Coscine ist eine Forschungsdatenmanagement-Plattform, die Forschenden die Verwaltung von Forschungs(meta)daten ermöglicht. Die Coscine Selection Policy ist ein Leitfaden für Forschende bei der Beantragung von DataStorage.nrw Speicherplatz über Coscine-JARDS . In dem Dokument werden die Kriterien für die Bewilligung von Speicherplatzanträgen erläutert und konkrete Hilfestellungen für eine erfolgreiche Beantragung gegeben. Der Aufbau des Dokuments orientiert sich an der Reihenfolge der Fragestellungen im Rahmen eines Speicherplatzantrags über Coscine-JARDS . Die Kriterien der Coscine Selection Policy resultieren aus der Umsetzung des Bewirtschaftungskonzept der Forschungsdatenspeicherinfrastruktur der DH.NRW (FDSI.nrw) und sind ein wichtiger Baustein der Transparenz der TRUST Prinzipien (Transparency, Responsibility, User Focus, Sustainability, Technology) durch Coscine. Coscine is a research data management platform that enables researchers to manage research (meta)data. The Coscine Selection Policy is a guide for researchers applying for DataStorage.nrw storage space via Coscine-JARDS . The document explains the criteria for approving storage space requests and provides specific guidance for a successful application. The structure of the document is based on the sequence of questions asked in a storage space request via Coscine-JARDS. The criteria of the Coscine Selection Policy result from the implementation of the management concept of the DH.NRW research data storage infrastructure (FDSI.nrw) and are an important component of Coscine's implementation of the transparency of the TRUST principles (Transparency, Responsibility, User Focus, Sustainability, Technology).", "originalKeywords": [ "Coscine", "JARDS", "DataStorage.nrw", "DH.NRW", "Speicherplatz", "Speicherplatzantrag", "TRUST-Prinzipien", "FAIR-Prinzipien" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/18267868", "versionsURL": "https://zenodo.org/api/records/18267868/versions", "historyURL": "https://zenodo.org/records/17366430", "materials": [ { "name": "eng_Selection_Policy_Coscine_DataStorage.nrw.pdf", "url": "https://zenodo.org/api/records/18267868/files/eng_Selection_Policy_Coscine_DataStorage.nrw.pdf/content", "checksum": "md5:04e8a035a1ae2474cc40999f82d45616" }, { "name": "de_Selection_Policy_Coscine_DataStorage.nrw.pdf", "url": "https://zenodo.org/api/records/18267868/files/de_Selection_Policy_Coscine_DataStorage.nrw.pdf/content", "checksum": "md5:546fbaf378d9eb058ac16e0bc02d1fef" } ], "relations": [ { "identifier": "10.5281/zenodo.17342214", "relation": "isRequiredBy", "resource_type": "publication", "scheme": "doi" }, { "identifier": "10.5281/zenodo.16035496", "relation": "isSupplementedBy", "resource_type": "publication", "scheme": "doi" }, { "identifier": "10.5281/zenodo.14886334", "relation": "isSupplementedBy", "resource_type": "publication", "scheme": "doi" } ], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/18267868", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:7f0bf6f8fd784eb5fa", "topic:keyword:c35e119f40e1074b5a", "topic:keyword:08aab2424db3bd47d9", "topic:keyword:ada9c5116bc3f24eb0", "topic:keyword:b6cb4494dcef7c1ea3", "topic:keyword:6dd04cfbac34a92e6a", "topic:keyword:6f8cb8b1c655c604ac", "topic:keyword:cee9ac365836a9131c", "topic:rdm", "topic:metadata", "topic:open-science" ], "currentRelease": null, "year": "2026", "citation": "Jansen, Katja; Lang, Ilona; Robrecht, Michèle; Grünwald, Katharina M. E.; Bossert, Lukas C.; Nellesen, Marcel; Politze, Marius. 2026-01-19. Coscine Selection Policy - Kriterien für die Bewilligung von DataStorage.nrw Speicherplatzanträgen über Coscine. https://doi.org/10.5281/zenodo.18267868", "bibtex": "@misc{work-zenodo-17366430,\n title = {Coscine Selection Policy - Kriterien für die Bewilligung von DataStorage.nrw Speicherplatzanträgen über Coscine},\n author = {Jansen, Katja and Lang, Ilona and Robrecht, Michèle and Grünwald, Katharina M. E. and Bossert, Lukas C. and Nellesen, Marcel and Politze, Marius},\n year = {2026},\n date = {2026-01-19},\n doi = {10.5281/zenodo.18267868},\n url = {https://doi.org/10.5281/zenodo.18267868},\n note = {Publication}\n}\n", "externalReferences": [ { "identifier": "10.5281/zenodo.17342214", "relation": "isRequiredBy", "resource_type": "publication", "scheme": "doi", "url": "https://doi.org/10.5281/zenodo.17342214", "sourceVersion": "10.5281/zenodo.18267868", "title": "Bewirtschaftungskonzept des FDM:Storage.nrw der DH.NRW", "description": "Das Bewirtschaftungskonzept des FDM:Storage.nrw der DH.NRW regelt die Vergabe von FDM:Storage.nrw Speicherplatz durch FDM-Landesbasisdienste. FDM:Storage.nrw umfasst den DataStorage.nrw, einen redundanten S3-Objektspeicher, sowie das DataArchive.nrw für langfristige Speicherung archivierter Daten. Das FDM:Storage.nrw Bewirtschaftungskonzept richtet sich in erster Linie an Personen, die FDM-Landesbasisdienste betreiben und Speicherplatz vom FDM:Storage.nrw bereitstellen möchten. Das Bewirtschaftungskonzept erläutert die Rahmenbedingungen für die Speicherplatzvergabe durch Landesbasisdienste, wie z.B. ein wissenschaftsgeleitetes Vergabeverfahren zur Zuteilung von Speicherplatz. Die mögliche Speicherdauer wird klar definiert, ebenso wie die unterstützten Forschungsinitiativen, zu denen sowohl Forschungsprojekte als auch Datenpools gehören. Das Konzept behandelt auch Verfahren zur Datenrettung wertvoller Datensätze sowie die Ermöglichung kooperativer Nutzung zwischen verschiedenen Einrichtungen. Ein weiterer wichtiger Aspekt ist die Einhaltung der FAIR-Prinzipien, um die Nachnutzbarkeit von Daten sicherzustellen. Zudem müssen FDM-Landesbasisdienste eine Selection Policy veröffentlichen, in der ihre Auswahlkriterien dargelegt sind. Transparente Reportingzahlen über die Nutzung müssen regelmäßig übermittelt werden. Abschließend beschreibt das Konzept die Kriterien für die Akkreditierung von FDM-Landesbasisdiensten, um Qualität und Nachhaltigkeit zu gewährleisten.", "concept": true, "recordId": "20305901", "versionDOI": "10.5281/zenodo.20305901", "conceptDOI": "10.5281/zenodo.17342214", "date": "2026-05-20", "authors": [ { "name": "Lang, Ilona", "affiliation": "RWTH Aachen University", "orcid": "0000-0002-7202-5982" }, { "name": "Claus, Florian", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-4480-8952" }, { "name": "Rehwald, Stephanie", "affiliation": "Universität Duisburg-Essen Universitätsbibliothek Duisburg-Essen", "orcid": "0000-0002-5884-4471" }, { "name": "Cyra-Wolf, Magdalene Alice", "affiliation": "fdm.nrw - Landesinitiative für Forschungsdatenmanagement in NRW", "orcid": "0000-0001-7738-2703" }, { "name": "Jansen, Katja", "affiliation": "RWTH Aachen University", "orcid": "0009-0005-7076-9848" }, { "name": "Willems, Florian", "affiliation": "Tektonix - Gesellschaft für digitale Nachhaltigkeit mbH", "orcid": "0000-0003-0531-8432" }, { "name": "Werger, Michael", "affiliation": null, "orcid": "0009-0001-8756-8955" }, { "name": "Eifert, Thomas", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-1996-0944" }, { "name": "Politze, Marius", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3175-0659" } ], "metadataSource": "https://zenodo.org/api/records/20305901", "retrievedAt": "2026-11-09T07:41:36.037Z" } ], "pageURL": "/knowledge/works/zenodo-17366430/", "contentFile": "content/knowledge/works/zenodo-17366430.md" }, { "id": "work:zenodo:17867005", "family": "17867005", "recordId": "17867006", "title": "DKZ.2R Data Competence College - Reproducibility in Research", "language": "", "type": "Event", "subtype": "event", "authors": [ { "name": "Janz, Alicia", "affiliation": "University of Cologne", "orcid": "0000-0002-8540-7744" }, { "name": "Hartman, Jonathan", "affiliation": "RWTH Aachen University", "orcid": "0009-0000-2792-106X" }, { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" }, { "name": "Immel, Katharina", "affiliation": "Forschungszentrum Jülich", "orcid": "0000-0002-3579-5240" }, { "name": "Mielke, Alexandra", "affiliation": "Hochschule Bonn-Rhein-Sieg", "orcid": "0009-0003-1749-8220" }, { "name": "Winter, Bodo", "affiliation": "University of Birmingham", "orcid": "0000-0001-6036-6774" }, { "name": "Kaithalikunnel Chandran, Anoop", "affiliation": "Forschungszentrum Jülich", "orcid": "0000-0001-9078-0132" }, { "name": "Kunkel, Julian", "affiliation": null, "orcid": "0000-0002-6915-1179" } ], "contributors": [], "date": "2025-12-09", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.17867006", "conceptDOI": "10.5281/zenodo.17867005", "version": "", "keywords": [], "description": "The second Data Competence College \"Reproducibility in Research\" was hosted from November 24th to 26th, 2025 at the IT Center of RWTH Aachen University in Germany. Based on the concept of the Wissenschaftskolleg in Berlin or the Institute of Advanced Studies in Princeton, we invited three individuals with high data competence from different scientific fields (“Data Experts”) to participate as part of the Data Competence College: Prof. Julian Kunkel ( University of Göttingen, Germany; Gesellschaft für wissenschaftliche Datenverarbeitung mbH Göttingen (GWDG )) Prof. Bodo Winter ( University of Birmingham , UK) Anoob K. Chandran (Forschungszentrum Jülich GmbH, Germany) For three days we aimed to create a space where not only local scientists, and especially early career researchers, learn from the data experts and each other regarding research data and methods but also data experts could inspire each other. The schedule included keynote presentations by all data experts, poster and group presentations by the participants, 1:1 sessions between data experts and early career researchers, as well as a method- and data-related workshop. We aimed foremost to create an environment in which everyone feels safe to give input, share their knowledge and learn from the other participants and experts.", "originalKeywords": [], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/17867006", "versionsURL": "https://zenodo.org/api/records/17867006/versions", "historyURL": "https://zenodo.org/records/17867005", "materials": [ { "name": "2025_11_25_Data_Competence_College_Schedule+abstracts.pdf", "url": "https://zenodo.org/api/records/17867006/files/2025_11_25_Data_Competence_College_Schedule+abstracts.pdf/content", "checksum": "md5:d276d09f089a063817720d5f42c0c1ea" }, { "name": "2025_12_Summary_DCCII.pdf", "url": "https://zenodo.org/api/records/17867006/files/2025_12_Summary_DCCII.pdf/content", "checksum": "md5:053c0036d8d96c81a4c1c3f0f0d78d09" }, { "name": "Data_Competence_College2_Poster_Martin_Schopen.pdf", "url": "https://zenodo.org/api/records/17867006/files/Data_Competence_College2_Poster_Martin_Schopen.pdf/content", "checksum": "md5:8c5e1d16e6e52a49bac5fd8e27b5346c" }, { "name": "Data_Competence_College2_Poster_Carolin_Neuroth.pdf", "url": "https://zenodo.org/api/records/17867006/files/Data_Competence_College2_Poster_Carolin_Neuroth.pdf/content", "checksum": "md5:bced420f1380210f1ea89dc1e430068f" } ], "relations": [], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/17867006", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:reproducibility", "topic:learning" ], "currentRelease": null, "year": "2025", "citation": "Janz, Alicia; Hartman, Jonathan; Bossert, Lukas C.; Immel, Katharina; Mielke, Alexandra; Winter, Bodo; Kaithalikunnel Chandran, Anoop; Kunkel, Julian. 2025-12-09. DKZ.2R Data Competence College - Reproducibility in Research. https://doi.org/10.5281/zenodo.17867006", "bibtex": "@misc{work-zenodo-17867005,\n title = {DKZ.2R Data Competence College - Reproducibility in Research},\n author = {Janz, Alicia and Hartman, Jonathan and Bossert, Lukas C. and Immel, Katharina and Mielke, Alexandra and Winter, Bodo and Kaithalikunnel Chandran, Anoop and Kunkel, Julian},\n year = {2025},\n date = {2025-12-09},\n doi = {10.5281/zenodo.17867006},\n url = {https://doi.org/10.5281/zenodo.17867006},\n note = {Event}\n}\n", "pageURL": "/knowledge/works/zenodo-17867005/", "contentFile": "content/knowledge/works/zenodo-17867005.md" }, { "id": "work:zenodo:17494834", "family": "17494834", "recordId": "17494835", "title": "DALIA Federated Curation Concept", "language": "eng", "type": "Presentation", "subtype": "presentation", "authors": [ { "name": "Zubilewicz, Maciej", "affiliation": null, "orcid": "0009-0008-6320-5579" }, { "name": "Steiner, Petra", "affiliation": null, "orcid": "0000-0001-8997-2620" }, { "name": "Schrade, Torsten", "affiliation": null, "orcid": "0000-0002-0953-2818" }, { "name": "Hüppe, Henrika Maria", "affiliation": null, "orcid": "0000-0002-0570-7924" }, { "name": "Haugwitz, Jan-Michael", "affiliation": null, "orcid": "0009-0007-3576-3947" }, { "name": "Bossert, Lukas C.", "affiliation": null, "orcid": "0000-0003-3076-3968" }, { "name": "Politze, Marius", "affiliation": null, "orcid": "0000-0003-3175-0659" }, { "name": "Müller, Matthias", "affiliation": null, "orcid": "0000-0003-2545-5258" }, { "name": "Herres-Pawlis, Sonja", "affiliation": null, "orcid": "0000-0002-4354-4353" } ], "contributors": [], "date": "2025-10-31", "datePrecision": "day", "event": { "title": "2nd Conference on Research Data Infrastructure", "acronym": "CoRDI", "dates": "26-28 August 2025.", "place": "Aachen, Germany", "session": "Session 8. Educating" }, "doi": "10.5281/zenodo.17494835", "conceptDOI": "10.5281/zenodo.17494834", "version": "", "keywords": [ "Data Literacy", "Research Data Management", "DALIA", "OER", "Search Platform", "Curation" ], "description": "In the rapidly expanding digital research landscape, curation is crucial for sustaining high-quality Open Educational Resources (OER) especially in research data management (RDM). As OER ecosystems grow, the proliferation of both human- and machine-generated content presents significant challenges for maintaining discoverability and educational relevance. The DALIA portal, a specialized search engine for OER on data literacy, is designed to ensure that all indexed resources meet high educational and technical standards across diverse scientific domains. This contribution examines how a comprehensive federated curation approach—drawing on distributed expertise from various scientific communities, National Research Data Infrastructure (NFDI) consortia, data competency centers, and federal RDM initiatives—will provide the foundation for DALIA's quality assurance framework. Unlike traditional centralized curation models, DALIA's federated approach will enable decentralized sourcing while ensuring semantic coherence and metadata integrity across platforms. This system will overcome the limitations of centralized quality control by leveraging domain-specific knowledge from multiple scientific communities. It will support customizable metadata schemas, such as the DALIA Interchange Format, which accommodate discipline-specific terminology, and community-specific collections. Additionally, collaborative curation tools will enable community-driven quality assessment. Through these mechanisms, scientific communities will actively participate in building and maintaining high-quality educational resource collections tailored to their specific needs. DALIA's comprehensive quality assurance system will integrate both AI-enhanced capabilities and API-driven content acquisition to create a sophisticated curation ecosystem. A key innovation will be the embedding of artificial intelligence in the curation interface to assist subject-matter experts in efficiently classifying, annotating, and enhancing resource metadata. This AI augmentation will include semantic tagging, content summarization, quality assessment prompts, and cross-referencing with existing taxonomies. Simultaneously, standardized APIs and persistent resource identifiers will automatically harvest metadata from source repositories, pre-populating curation forms with essential information. Comparative evaluation of leading OER platforms will reveal that without robust curation, even large-scale repositories fail to deliver relevant results for nuanced or interdisciplinary topics. In contrast, DALIA's approach will significantly improve search precision, allowing users to retrieve contextually aligned, pedagogically appropriate materials more reliably. By positioning this federated curation approach at the core of its infrastructure, DALIA will develop from a basic aggregator into an intelligent educational resource hub that actively supports research data management education. This work will highlight curation as a foundational layer of OER infrastructure—one that must evolve in tandem with the accelerating pace of automated content generation. It also advocates for the strategic integration of human-AI collaboration in curation workflows as a necessary response to the growing complexity and scale of educational resource management in the digital era. Currently, DALIA indexes a wide spectrum of data literacy tools, training materials, and best practices, and welcomes materials from all sides, nationally and also internationally. The platform is under continuous development with a strong focus on community engagement. Researchers, educators, data stewards, and professionals from libraries and archives are invited to contribute content, help shaping metadata standards, and provide feedback to ensure that DALIA stays responsive, inclusive, and aligned with the evolving data literacy landscape. By fostering collaboration and co-creation, DALIA strives to become a sustainable pillar of the academic data culture. DALIA is currently funded by the Federal Ministry of Research, Technology, and Space (BMFTR) and the funding measure from the EU’s Capacity Building and Resilience Facility under the funding code 16DWWQP07.", "originalKeywords": [ "Data Literacy", "Research Data Management", "DALIA", "OER", "Search Platform", "Curation" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/17494835", "versionsURL": "https://zenodo.org/api/records/17494835/versions", "historyURL": "https://zenodo.org/records/17494834", "materials": [ { "name": "2025-08-28_DALIA_Federated_Curation_Concept.pdf", "url": "https://zenodo.org/api/records/17494835/files/2025-08-28_DALIA_Federated_Curation_Concept.pdf/content", "checksum": "md5:211f0fd442c80f5c28be2e63dc5ebe3f" } ], "relations": [ { "identifier": "10.5281/zenodo.16736345", "relation": "isDescribedBy", "resource_type": "publication-conferencepaper", "scheme": "doi" } ], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/17494835", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:438a7aeb7412081446", "topic:rdm", "topic:keyword:a079a18a4e4105b2e7", "topic:learning", "topic:keyword:85e9f0a2a1be5878ac", "topic:keyword:2c4fe4bf73b64cc01f", "topic:metadata" ], "currentRelease": null, "year": "2025", "citation": "Zubilewicz, Maciej; Steiner, Petra; Schrade, Torsten; Hüppe, Henrika Maria; Haugwitz, Jan-Michael; Bossert, Lukas C.; Politze, Marius; Müller, Matthias; Herres-Pawlis, Sonja. 2025-10-31. 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It outlines the ELN file format, defined by the ELN Consortium, the RO-Crate file format, as well as how this format is implemented in linking data and connecting research data management (RDM) tools.", "originalKeywords": [ "ELN", "interoperability", "research data management" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/17047516", "versionsURL": "https://zenodo.org/api/records/17047516/versions", "historyURL": "https://zenodo.org/records/17047515", "materials": [ { "name": "2025-08-26_cordi_elnFormat_poster.pdf", "url": "https://zenodo.org/api/records/17047516/files/2025-08-26_cordi_elnFormat_poster.pdf/content", "checksum": "md5:ae618fda09fca79c36518c7c05865cb4" } ], "relations": [], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/17047516", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:81e31e2555868ca14b", "topic:keyword:83ed0d25f7691418e3", "topic:rdm", "topic:keyword:590184a495a103a456" ], "currentRelease": null, "year": "2025", "citation": "Brinckmann, Steffen; Parks, Nicole Andrea; Bossert, Lukas C.; Schwaiger, Ruth. 2025-09-03. The ELN Format for the exchange of research data between open source projects. Version 1.0. https://doi.org/10.5281/zenodo.17047516", "bibtex": "@misc{work-zenodo-17047515,\n title = {The ELN Format for the exchange of research data between open source projects},\n author = {Brinckmann, Steffen and Parks, Nicole Andrea and Bossert, Lukas C. and Schwaiger, Ruth},\n year = {2025},\n date = {2025-09-03},\n doi = {10.5281/zenodo.17047516},\n url = {https://doi.org/10.5281/zenodo.17047516},\n version = {1.0},\n note = {Poster}\n}\n", "preview": { "url": "/research/previews/17047515.jpg", "source": "https://zenodo.org/records/17047516", "derivedFrom": "https://zenodo.org/api/iiif/record:17047516:2025-08-26_cordi_elnFormat_poster.pdf/full/%5E750,/0/default.jpg", "recordId": "17047516", "license": "cc-by-4.0", "method": "Zenodo IIIF first-page thumbnail", "retrievedAt": "2026-11-08T21:12:22.867Z" }, "pageURL": "/knowledge/works/zenodo-17047515/", "contentFile": "content/knowledge/works/zenodo-17047515.md" }, { "id": "work:zenodo:16735815", "family": "16735815", "recordId": "16735816", "title": "The ELN Format for the exchange of research data between different open source projects", "language": "", "type": "Publication", "subtype": "conferencepaper", "authors": [ { "name": "Brinckmann, Steffen", "affiliation": "Forschungszentrum Jülich", "orcid": "0000-0003-0930-082X" }, { "name": "Parks, Nicole A.", "affiliation": "RWTH Aachen", "orcid": "0000-0002-6243-2840" }, { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen", "orcid": "0000-0003-3076-3968" }, { "name": "Schwaiger, Ruth", "affiliation": "Forschungszentrum Jülich", "orcid": "0000-0001-8940-2361" } ], "contributors": [ { "name": "Sure-Vetter, York", "affiliation": "Nationale Forschungsdateninfrastruktur (NFDI) e.V.", "type": "Editor", "orcid": "0000-0002-4522-1099" }, { "name": "Groth, Paul", "affiliation": "University of Amsterdam", "type": "Editor", "orcid": "0000-0003-0183-6910" } ], "date": "2025-08-04", "datePrecision": "day", "event": { "title": "2nd Conference on Research Data Infrastructure", "acronym": "CoRDI", "dates": "26-28 August 2025", "place": "Aachen, Germany", "url": "https://www.nfdi.de/cordi-2025/", "session": "6. Context" }, "doi": "10.5281/zenodo.16735816", "conceptDOI": "10.5281/zenodo.16735815", "version": "", "keywords": [ "ELN", "interoperability", "data exchange" ], "description": "The ELN file format [1], developed by the ELN Consortium [2]–a group of more than six members representing different open-source electronic lab notebooks (ELNs)–is designed to enable long-term interoperable data exchange between ELNs. It is a dialect of RO-Crate [3], which inherently supports rich metadata to capture documentation, provenance, and associated data files. In contrast to formats like BagIt, which focus on reliable transfer of research data, RO-Crate uses JSON-LD to support semantic data representation. Built on top of schema.org, RO-Crate balances a set of defined properties with flexibility–essential for data management projects that span diverse research domains, that evolve as technology does. Additionally, RO-Crate offers several validators to help identify implementation inconsistencies across tools, facilitating interoperability. As a lightweight, open-source data package tailored for ELNs, the ELN format can be integrated into various workflows for data exchange, not only among ELNs, but also with external infrastructures and research applications. Researchers often rely on storage solutions beyond those natively provided by ELNs. Being able to link raw, processed, or analyzed data directly to documentation supports better organization and contributes to a more complete representation of research. For example, a workflow could connect the research data management platform Coscine [4] with ELNs, such as eLabFTW [5] or PASTA-ELN [6]. In this setup, selected files are automatically (a) transferred to Coscine, (b) linked to the corresponding ELN documentation, and (c) annotated with a basic metadata set to improve searchability and findability within Coscine. The connection is managed natively on both ends, ensuring robustness and long-term maintainability. The metadata link is included in the .eln file, following the RO-Crate specification, and naturally includes domain-specific metadata as needed. Our contribution will focus on two key parts: (1) A description of the ELN file format and the lessons learned in developing a common standard across six different open-source ELN software tools in the research domain, and (2) a demonstration of how this format can be applied to enable seamless information exchange between ELNs and external infrastructure systems. We will therefore show how various developments and tools in the realm of RDM contribute to data efficient and contextualized data exchange.", "originalKeywords": [ "ELN", "interoperability", "data exchange" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/16735816", "versionsURL": "https://zenodo.org/api/records/16735816/versions", "historyURL": "https://zenodo.org/records/16735815", "materials": [ { "name": "CoRDI_2025_paper_75.pdf", "url": "https://zenodo.org/api/records/16735816/files/CoRDI_2025_paper_75.pdf/content", "checksum": "md5:c1742700451c80bde4adc5ae4c55e0e9" } ], "relations": [], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/16735816", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:81e31e2555868ca14b", "topic:keyword:83ed0d25f7691418e3", "topic:keyword:9e9b935d687af50c5d", "topic:rdm", "topic:metadata", "topic:keyword:590184a495a103a456" ], "currentRelease": null, "year": "2025", "citation": "Brinckmann, Steffen; Parks, Nicole A.; Bossert, Lukas C.; Schwaiger, Ruth. 2025-08-04. The ELN Format for the exchange of research data between different open source projects. https://doi.org/10.5281/zenodo.16735816", "bibtex": "@misc{work-zenodo-16735815,\n title = {The ELN Format for the exchange of research data between different open source projects},\n author = {Brinckmann, Steffen and Parks, Nicole A. and Bossert, Lukas C. and Schwaiger, Ruth},\n year = {2025},\n date = {2025-08-04},\n doi = {10.5281/zenodo.16735816},\n url = {https://doi.org/10.5281/zenodo.16735816},\n note = {Publication}\n}\n", "pageURL": "/knowledge/works/zenodo-16735815/", "contentFile": "content/knowledge/works/zenodo-16735815.md" }, { "id": "work:zenodo:16736345", "family": "16736345", "recordId": "16736346", "title": "Safeguarding Quality of OER Materials in DALIA: A Federated Curation Concept", "language": "", "type": "Publication", "subtype": "conferencepaper", "authors": [ { "name": "Herres-Pawlis, Sonja", "affiliation": "RWTH Aachen University", "orcid": "0000-0002-4354-4353" }, { "name": "Zubilewicz, Maciej", "affiliation": "RWTH Aachen University", "orcid": "0009-0008-6320-5579" }, { "name": "Steiner, Petra", "affiliation": "Technical University of Darmstadt" }, { "name": "Schrade, Torsten", "affiliation": "Academy of Sciences and Literature Mainz", "orcid": "0000-0002-0953-2818" }, { "name": "Hüppe, Henrika", "affiliation": "RWTH Aachen University" }, { "name": "Bossert, Lukas", "affiliation": "RWTH Aachen University" }, { "name": "Politze, Marius", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3175-0659" }, { "name": "Müller, Matthias", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-2545-5258" } ], "contributors": [ { "name": "Sure-Vetter, York", "affiliation": "Nationale Forschungsdateninfrastruktur (NFDI) e.V.", "type": "Editor", "orcid": "0000-0002-4522-1099" }, { "name": "Groth, Paul", "affiliation": "University of Amsterdam", "type": "Editor", "orcid": "0000-0003-0183-6910" } ], "date": "2025-08-04", "datePrecision": "day", "event": { "title": "2nd Conference on Research Data Infrastructure", "acronym": "CoRDI", "dates": "26-28 August 2025", "place": "Aachen, Germany", "url": "https://www.nfdi.de/cordi-2025/", "session": "8. Educating" }, "doi": "10.5281/zenodo.16736346", "conceptDOI": "10.5281/zenodo.16736345", "version": "", "keywords": [ "Data Literacy", "Research Data Management", "OER", "Search Platform", "Curation" ], "description": "In the rapidly expanding digital research landscape, curation is crucial for sustaining high-quality Open Educational Resources (OER) especially in research data management (RDM). As OER ecosystems grow, the proliferation of both human- and machine-generated content presents significant challenges for maintaining discoverability and educational relevance. The DALIA portal, a specialized search engine for OER on data literacy, is designed to ensure that all indexed resources meet high educational and technical standards across diverse scientific domains. This contribution examines how a comprehensive federated curation approach—drawing on distributed expertise from various scientific communities, National Research Data Infrastructure (NFDI) consortia, data competency centers, and federal RDM initiatives—will provide the foundation for DALIA's quality assurance framework. Unlike traditional centralized curation models, DALIA's federated approach will enable decentralized sourcing while ensuring semantic coherence and metadata integrity across platforms. This system will overcome the limitations of centralized quality control by leveraging domain-specific knowledge from multiple scientific communities. It will support customizable metadata schemas, such as the DALIA Interchange Format [1], which accommodate discipline-specific terminology, and community-specific collections. Additionally, collaborative curation tools will enable community-driven quality assessment. Through these mechanisms, scientific communities will actively participate in building and maintaining high-quality educational resource collections tailored to their specific needs. DALIA's comprehensive quality assurance system will integrate both AI-enhanced capabilities and API-driven content acquisition to create a sophisticated curation ecosystem. A key innovation will be the embedding of artificial intelligence in the curation interface to assist subject-matter experts in efficiently classifying, annotating, and enhancing resource metadata. This AI augmentation will include semantic tagging, content summarization, quality assessment prompts, and cross-referencing with existing taxonomies. Simultaneously, standardized APIs and persistent resource identifiers will automatically harvest metadata from source repositories, pre-populating curation forms with essential information. Comparative evaluation of leading OER platforms will reveal that without robust curation, even large-scale repositories fail to deliver relevant results for nuanced or interdisciplinary topics. In contrast, DALIA's approach will significantly improve search precision, allowing users to retrieve contextually aligned, pedagogically appropriate materials more reliably. By positioning this federated curation approach at the core of its infrastructure, DALIA will develop from a basic aggregator into an intelligent educational resource hub that actively supports research data management education. This work will highlight curation as a foundational layer of OER infrastructure—one that must evolve in tandem with the accelerating pace of automated content generation. It also advocates for the strategic integration of human-AI collaboration in curation workflows as a necessary response to the growing complexity and scale of educational resource management in the digital era. Currently, DALIA indexes a wide spectrum of data literacy tools, training materials, and best practices, and welcomes materials from all sides, nationally and also internationally. The platform is under continuous development with a strong focus on community engagement. Researchers, educators, data stewards, and professionals from libraries and archives are invited to contribute content, help shaping metadata standards, and provide feedback to ensure that DALIA stays responsive, inclusive, and aligned with the evolving data literacy landscape. By fostering collaboration and co-creation, DALIA strives to become a sustainable pillar of the academic data culture.", "originalKeywords": [ "Data Literacy", "Research Data Management", "OER", "Search Platform", "Curation" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/16736346", "versionsURL": "https://zenodo.org/api/records/16736346/versions", "historyURL": "https://zenodo.org/records/16736345", "materials": [ { "name": "CoRDI_2025_paper_355.pdf", "url": "https://zenodo.org/api/records/16736346/files/CoRDI_2025_paper_355.pdf/content", "checksum": "md5:4ee51b936b4029fa94d54badd1e8316c" } ], "relations": [], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/16736346", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:438a7aeb7412081446", "topic:rdm", "topic:learning", "topic:keyword:85e9f0a2a1be5878ac", "topic:keyword:2c4fe4bf73b64cc01f", "topic:metadata" ], "currentRelease": null, "year": "2025", "citation": "Herres-Pawlis, Sonja; Zubilewicz, Maciej; Steiner, Petra; Schrade, Torsten; Hüppe, Henrika; Bossert, Lukas; Politze, Marius; Müller, Matthias. 2025-08-04. Safeguarding Quality of OER Materials in DALIA: A Federated Curation Concept. https://doi.org/10.5281/zenodo.16736346", "bibtex": "@misc{work-zenodo-16736345,\n title = {Safeguarding Quality of OER Materials in DALIA: A Federated Curation Concept},\n author = {Herres-Pawlis, Sonja and Zubilewicz, Maciej and Steiner, Petra and Schrade, Torsten and Hüppe, Henrika and Bossert, Lukas and Politze, Marius and Müller, Matthias},\n year = {2025},\n date = {2025-08-04},\n doi = {10.5281/zenodo.16736346},\n url = {https://doi.org/10.5281/zenodo.16736346},\n note = {Publication}\n}\n", "pageURL": "/knowledge/works/zenodo-16736345/", "contentFile": "content/knowledge/works/zenodo-16736345.md" }, { "id": "work:zenodo:14536654", "family": "14536654", "recordId": "15606230", "title": "DKZ Network Analysis / DKZ Netzwerkanalyse", "language": "eng", "type": "Dataset", "subtype": "dataset", "authors": [ { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" } ], "contributors": [], "date": "2025-06-06", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.15606230", "conceptDOI": "10.5281/zenodo.14536654", "version": "0.0.2", "keywords": [ "network", "DKZ", "Datenkompetenzzentrum", "dataset", "network analysis", "dkz", "research_data_management", "nfdi" ], "description": "This project is about the Datenkompetenzzentren (DKZ) / Data Competence Centers. It analysis its connections between entities and visualizes those on a map. Please note the link to the repository: https://git.rwth-aachen.de/dl/best-practices/dkz-network-analysis/ Data The data used for the network has been taken from Wikidata using two queries: - `wikidata-edges.sparql` - `wikidata-nodes.sparql` The results from the Wikidata querries are stored in: - `dkz-network-analysis-edges.csv` - `dkz-network-analysis-nodes.csv` Visualization We used `Gephi 0.10.1` for the visualization. The `.gephi`-file is also provided. You find all maps as layers in `dkz-network-analysis-map.svg`. Versioning 0.0.2: change funding logo Licence The maps are licenced under CC-BY: CC-BY Lukas C. Bossert @ RWTH Aachen & DKZ.2R", "originalKeywords": [ "network", "DKZ", "Datenkompetenzzentrum" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/15606230", "versionsURL": "https://zenodo.org/api/records/15606230/versions", "historyURL": "https://zenodo.org/records/14536654", "materials": [ { "name": "dkz-network-analysis.gephi", "url": "https://zenodo.org/api/records/15606230/files/dkz-network-analysis.gephi/content", "checksum": "md5:b12833b1df96a4b9f1c1001c0dca275b" }, { "name": "dkz-network-analysis-map__v0-0-2_colors_6000px.png", "url": "https://zenodo.org/api/records/15606230/files/dkz-network-analysis-map__v0-0-2_colors_6000px.png/content", "checksum": "md5:20521c7aeaf935825b538f27d06146f1" }, { "name": "dkz-network-analysis-map__v0-0-2_colors_400px.png", "url": "https://zenodo.org/api/records/15606230/files/dkz-network-analysis-map__v0-0-2_colors_400px.png/content", "checksum": "md5:224de1afb5ac4edaea61930963718566" }, { "name": "dkz-network-analysis-map__v0-0-2_colors_1000px.png", "url": "https://zenodo.org/api/records/15606230/files/dkz-network-analysis-map__v0-0-2_colors_1000px.png/content", "checksum": "md5:6dc65decc21e7d60a876ed80f7bf6d70" }, { "name": "dkz-network-analysis-nodes.csv", "url": "https://zenodo.org/api/records/15606230/files/dkz-network-analysis-nodes.csv/content", "checksum": "md5:a976f9594a139d4209f2a9f1ee76305b" }, { "name": "wikidata-edges.sparql", "url": "https://zenodo.org/api/records/15606230/files/wikidata-edges.sparql/content", "checksum": "md5:e8ce99755491ee90d672583e0d553020" }, { "name": "dkz-network-analysis-map__v0-0-2_colors.pdf", "url": "https://zenodo.org/api/records/15606230/files/dkz-network-analysis-map__v0-0-2_colors.pdf/content", "checksum": "md5:f7ded0f0963c19172cf8ed60538f7323" }, { "name": "wikidata-nodes.sparql", "url": "https://zenodo.org/api/records/15606230/files/wikidata-nodes.sparql/content", "checksum": "md5:46176563c471ee1a45cffde5e00e71c1" }, { "name": "README.md", "url": "https://zenodo.org/api/records/15606230/files/README.md/content", "checksum": "md5:e999d6885bad8377d4376cf31b076ee4" }, { "name": "dkz-network-analysis-map__v0-0-2_colors_3000px.png", "url": "https://zenodo.org/api/records/15606230/files/dkz-network-analysis-map__v0-0-2_colors_3000px.png/content", "checksum": "md5:7fa0d27ce77a86d527f126e2e287ff9e" }, { "name": "dkz-network-analysis-edges.csv", "url": "https://zenodo.org/api/records/15606230/files/dkz-network-analysis-edges.csv/content", "checksum": "md5:1298a2268ca155686ace8a67dfc0f8c2" } ], "relations": [], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/15606230", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [ { "title": "DKZ Network Analysis / DKZ Netzwerkanalyse", "publishedIn": { "name": "Zenodo", "date": "2025", "url": "https://doi.org/10.5281/zenodo.15606230" }, "authors": [ { "name": "Lukas C. Bossert" } ], "paper": { "doi": "https://doi.org/10.5281/zenodo.15606230" }, "categories": [ "research_data_management", "nfdi", "dataset" ], "tags": [ "dataset", "network analysis", "dkz" ] } ], "topics": [ "topic:keyword:3009be769fb8f956e8", "topic:nfdi", "topic:keyword:c8f70421a64588a3c6", "topic:keyword:b277fd623676a525c2", "topic:rdm", "topic:semantic-query", "topic:keyword:d2ea7f17126491f785" ], "currentRelease": null, "year": "2025", "citation": "Bossert, Lukas C.. 2025-06-06. DKZ Network Analysis / DKZ Netzwerkanalyse. Version 0.0.2. https://doi.org/10.5281/zenodo.15606230", "bibtex": "@dataset{work-zenodo-14536654,\n title = {DKZ Network Analysis / DKZ Netzwerkanalyse},\n author = {Bossert, Lukas C.},\n year = {2025},\n date = {2025-06-06},\n doi = {10.5281/zenodo.15606230},\n url = {https://doi.org/10.5281/zenodo.15606230},\n version = {0.0.2},\n note = {Dataset}\n}\n", "pageURL": "/knowledge/works/zenodo-14536654/", "contentFile": "content/knowledge/works/zenodo-14536654.md" }, { "id": "work:zenodo:7966673", "family": "7966673", "recordId": "15282166", "title": "Human intestinal Bacteria Collection (HiBC): Isolates and genomes metadata", "language": "", "type": "Dataset", "subtype": "dataset", "authors": [ { "name": "Hitch, Thomas C. A", "affiliation": "University Hospital of RWTH Aachen", "orcid": "0000-0003-2244-7412" }, { "name": "Masson, Johannes M.", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Pauvert, Charlie", "affiliation": "University Hospital of RWTH Aachen", "orcid": "0000-0001-9832-2507" }, { "name": "Bosch, Johanna", "affiliation": "University Hospital of RWTH Aachen", "orcid": "0000-0003-3982-849X" }, { "name": "Nüchtern, Selina", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Treichel, Nicole", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Razavi, Soheila", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Baloh, Marko", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Afrizal, Afrizal", "affiliation": "University Hospital of RWTH Aachen", "orcid": "0000-0001-8738-9706" }, { "name": "Kousetzi, Ntana", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Aguirre, Andrea M.", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Wylensek, David", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Coates, Amy", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Jennings, Susan A. V.", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Panyot, Atscharah", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Viehof, Alina", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Schmitz, Matthias A.", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Stuhrmann, Maximilian", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Deis, Evelyn C.", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Bisdorf, Kevin", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Cramer, Thorsten", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Lissin, Arthur", "affiliation": "Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures" }, { "name": "Schober, Isabel", "affiliation": "Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures" }, { "name": "Witte, Julius", "affiliation": "Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures" }, { "name": "Riedel, Thomas", "affiliation": "Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures" }, { "name": "Wende, Marie", "affiliation": "Helmholtz Centre for Infection Research" }, { "name": "Winter, Katrin A.", "affiliation": "Helmholtz Centre for Infection Research" }, { "name": "Riva, Alessandra", "affiliation": "University of Vienna" }, { "name": "Trinh, Stefanie", "affiliation": "University Hospital of RWTH Aachen" }, { "name": "Mitchell, Laura", "affiliation": "University of Nottingham" }, { "name": "Hartman, Jonathan", "affiliation": "RWTH Aachen University" }, { "name": "Berry, David", "affiliation": "University of Vienna" }, { "name": "Seitz, Jochen", "affiliation": "University of Duisburg-Essen" }, { "name": "Bossert, Lukas C.", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" }, { "name": "Allers, Thorsten", "affiliation": "University of Nottingham" }, { "name": "Strowig, Till", "affiliation": "Helmholtz Centre for Infection Research" }, { "name": "Abt, Birte", "affiliation": "Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures" }, { "name": "Reimer, Lorenz C.", "affiliation": "Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures", "orcid": "0000-0002-7805-0660" }, { "name": "Overmann, Jörg", "affiliation": "Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures", "orcid": "0000-0003-3909-7201" }, { "name": "Clavel, Thomas", "affiliation": "University Hospital of RWTH Aachen", "orcid": "0000-0002-7229-5595" } ], "contributors": [], "date": "2025-04-25", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.15282166", "conceptDOI": "10.5281/zenodo.7966673", "version": "", "keywords": [ "metadata", "human intestine", "gut microbiome", "bacteria", "anaerobe", "cultivation" ], "description": "The Human intestinal Bacteria Collection (HiBC) is a collection of bacterial strains, isolated from the human gut for which 16S rRNA gene sequences, genome sequences and culture conditions are made available to the research community. In addition to previously described bacteria, we include strains that represent novel species which have been taxonomically described and validly named, or will be in the future. This collection will be updated regularly. This dataset includes the taxonomy of the isolates, as well as metadata regarding their cultivation and isolation. We also provide metadata regarding the sequencing, genome assembly process and the biological sequences. UPDATE v7 : INSDC accession for Segatella sinensis CLA-AA-H117 was a missing value and is now the correct value of GCA_040324585.2. UPDATE v6: The growth atmosphere is now indicated by anaerobic or aerobic instead of \"Anaerobe/Aerobe\" that was a misleading term. The risk group of these two isolates went from 1 to 2: CLA-AA-H205: Anaerostipes caccae CLA-AA-H83: Bacteroides fragilis The risk group of the following isolates has been updated (usually from unknown to 1, or from 2 to 1): CLA-SR-H026: Aedoeadaptatus acetigenes CLA-KB-H139: Bacteroides xylanisolvens CLA-SR-H015: Bacteroides xylanisolvens CLA-AA-H187: Blautia fusiformis CLA-AA-H274: Brotaphodocola catenula CLA-AA-H286: Butyricimonas faecihominis CLA-AA-H278: Clostridium fessum CLA-AA-H147: Dorea ammoniilytica CLA-SR-H027: D orea formicigenerans CLA-KB-H89: Dorea longicatena CLA-KB-H94: Dorea longicatena CLA-SR-H022: Enterococcus lactis CLA-AA-H250: Hominenteromicrobium mulieris CLA-AA-H232: H ominilimicola fabiformis CLA-AA-H246: Hominisplanchenecus faecis CLA-AA-H276: Hominiventricola filiformis CLA-AA-H213: Oliverpabstia intestinalis CLA-AA-H241: Oliverpabstia intestinalis CLA-AA-H58: Pilosibacter fragilis CLA-KB-H110: Ruthenibacterium lactatiformans CLA-AA-H174: Segatella sinensis CLA-AA-H2: Veillonella parvula CLA-AA-H273: Waltera acetigignens Typos in media list have been fixed. UPDATE v5 : The accessions number for the genomes on INSDC databases are added under the column Accession. Plus two typos in the risk group column have been corrected as follow: CLA-AA-H173: from Risk Group 4 (!) to 2 like the other strain of Sutterella wadsworthensis CLA-AA-H198: from Risk Group 4 (!) to 1 like the other Bifidobacterium species. UPDATE v4 : Only the taxonomy of a couple of isolates has been changed, as follow: CLA-ER-H4: Collinsella sp900547855 instead of Collinsella sp900544645 CLA-AA-H142: Pilosibacter fragilis ( f__Clostridiaceae ) instead of Sakamotonia hominis gen. nov. ( f__Lachnospiraceae ) CLA-AA-H58: Pilosibacter fragilis ( f__Clostridiaceae ) instead of Sakamotonia hominis gen. nov. ( f__Lachnospiraceae ) CLA-AA-H89B: Lachnospira intestinalis sp. nov. instead of Lachnospira hominis sp. nov. CLA-JM-H10: Lachnospira hominis sp. nov. instead of Lachnospira intestinalis sp. nov. CLA-JM-H7B: Faecalibacterium taiwanense instead of Faecalibacterium faecis sp. nov. CLA-JM-H45: Merdimmobilis hominis instead of Hominicola intestinalis gen. nov. UPDATE v3 : The genome of one of our isolate had been unfortunately swapped. This mistake has been now corrected on Zenodo and Coscine. The genome of Segatella sinensis CLA-AA-H117 should be considered correct with 103 contigs and 3 671 232 nt. Please note that the genome available at the NCBI is the correct one (GCA_040324585.2). 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Reimer" }, { "name": "Jörg Overmann" }, { "name": "Thomas Clavel" } ], "contributors": [], "date": "2025", "datePrecision": "year", "doi": "10.1038/s41467-025-59229-9", "conceptDOI": "", "version": "", "keywords": [ "dataset", "hibc", "microbiology", "research_data_management", "dataset" ], "source": "https://doi.org/10.1038/s41467-025-59229-9", "materials": [], "relations": [], "event": null, "description": "", "venue": "Nature Communications", "participation": "authorship", "status": "legacy", "provenance": { "class": "editorial", "url": "https://lukascbossert.de/", "field": "data/en/sections/publications.yaml.publications[1]", "reason": "Preserved existing bibliography; original assertions retained in legacy metadata." }, "legacy": [ { "title": "HiBC: a publicly available collection of bacterial strains isolated from the human gut", "publishedIn": { "name": "Nature Communications", "date": "2025", "url": "https://doi.org/10.1038/s41467-025-59229-9" }, "authors": [ { "name": "Thomas C. 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It analysis its connections between entities and visualizes those on a map. Node size indicate the amount of participation in consortia. Weight of edges indicate the amount of collaboration between entities within consortia. Plots There are five different kind of plots. all: This shows the whole network of entities. Only universities and entities with at least three consortial participations are labelled. TU9: Highlighting the universities that are part of TU9 EXU: Highlighting all the universities with the status \"Exzellenzuniversität\" NHR: Highlighting members of the \"Nationales Hochleistungsrechnen\" Applicants: Highlighting the entities that have the role \"applicant\" for at least one consortium. Data See the link below to the data repository. The data used for the network has been taken from Wikidata using two queries: - `data/wikidata-edges.sparql` - `data/wikidata-nodes.sparql` The results have been annoted with additional information regarding TU9, EXU, NHR affiliations. Visualization See the link below to the data repository. We used `Gephi 0.10.1` for the visualization. The `.gephi`-file is stored at `data/`. You find all maps as layers in `maps/nfdi-network-analysis-map.svg`. Changelog v1-1-0 The colorset of edges has been adjusted to RGB 0,84,159. There are now \"focus-maps\" which show edges between entities of e.g. TU9, NHR, EXU. 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The decisive evidence lies in the oblique opening of the inner blocks, whose angle of inclination is similar to that of the steps of public assembly buildings.", "originalKeywords": [ "Rekonstruktion", "Antike", "Forum", "Paestum", "Archäologie" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/14030801", "versionsURL": "https://zenodo.org/api/records/14030801/versions", "historyURL": "https://zenodo.org/records/4039754", "materials": [ { "name": "auf-dem-forum-poster-paestum.pdf", "url": "https://zenodo.org/api/records/14030801/files/auf-dem-forum-poster-paestum.pdf/content", "checksum": "md5:4921828835c551f34f92c2580d78fa2b" }, { "name": "auf-dem-forum-poster-paestum.tar.gz", "url": "https://zenodo.org/api/records/14030801/files/auf-dem-forum-poster-paestum.tar.gz/content", "checksum": "md5:7062bf19948d5a8e9e9c1c7115f55c8f" } ], "relations": [ { "identifier": "10.5281/zenodo.2548873", "relation": "isSourceOf", "resource_type": "publication-dissertation", "scheme": "doi" }, { "identifier": "10.5281/zenodo.4039773", "relation": "isContinuedBy", "scheme": "doi" } ], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/14030801", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:3e428de8ec3b96c69f", "topic:archaeology", "topic:keyword:4eb41a2a9dfe70722e", "topic:keyword:706dcea28beeb04f3d" ], "currentRelease": null, "year": "2024", "citation": "Lukas C. 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Rekonstruktion einer Zuschauertribüne in Paestum. https://doi.org/10.5281/zenodo.14030801", "bibtex": "@misc{work-zenodo-4039754,\n title = {Rekonstruktion einer Zuschauertribüne in Paestum},\n author = {Bossert, Lukas C.},\n year = {2024},\n date = {2024-11-03},\n doi = {10.5281/zenodo.14030801},\n url = {https://doi.org/10.5281/zenodo.14030801},\n note = {Poster}\n}\n", "preview": { "url": "/research/previews/4039754.jpg", "source": "https://zenodo.org/records/14030801", "derivedFrom": "https://zenodo.org/api/iiif/record:14030801:auf-dem-forum-poster-paestum.pdf/full/%5E750,/0/default.jpg", "recordId": "14030801", "license": "cc-by-4.0", "method": "Zenodo IIIF first-page thumbnail", "retrievedAt": "2026-11-08T21:12:10.375Z" }, "pageURL": "/knowledge/works/zenodo-4039754/", "contentFile": "content/knowledge/works/zenodo-4039754.md" }, { "id": "work:zenodo:4039772", "family": "4039772", "recordId": "14030792", "title": "Filippo Coarellis Seilwinden-These für Fregellae", "language": "deu", "type": "Poster", "subtype": "poster", "authors": [ { "name": "Lukas C. Bossert", "affiliation": "RWTH Aachen University", "orcid": "0000-0003-3076-3968" } ], "contributors": [], "date": "2024-11-03", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.14030792", "conceptDOI": "10.5281/zenodo.4039772", "version": "", "keywords": [ "Rekonstruktion", "Antike", "Fregellae", "Tribüne" ], "description": "Auf dem Forum der antiken Stadt Fregellae rekonstruiert Filippo Coarelli (1998) Seilwinden in die doppelten Lochreihen an beiden Kurzseiten. Seine vorgebrachte Interpretation, mittels den rekonstruierten Seilwinden ein Seil über das gesamte Forum zu spannen, ist nicht nur aus logistischen Gründen unwahrscheinlich, sondern zudem aus physikalischen und nicht zuletzt aus logischen Gesichtspunkten unmöglich und daher abzulehnen. Die benötigte Zugkraft, um ein Seil zwischen zwei Winden möglichst straff zu spannen, ist nämlich höher als die Tragkraft des Seils selbst. Dies lässt sich nicht nur berechnen, sondern auch durch einen maßstabsgetreuen Nachbau beweisen. -------------- At the Forum of the ancient city of Fregellae, Filippo Coarelli (1998) reconstructs winches in the double rows of holes on both short sides. His proposed interpretation of using the reconstructed cable winches to stretch a rope across the entire forum, is not only unlikely for logistical reasons, but also from physical and not least from logical points of view impossible and therefore to be rejected. The tensile force required to tension a rope as tightly as possible between two winches, is higher than the load capacity of the rope itself. This can not only be calculated, but also proven by a true-to-scale replica.", "originalKeywords": [ "Rekonstruktion", "Antike", "Fregellae", "Tribüne" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/14030792", "versionsURL": "https://zenodo.org/api/records/14030792/versions", "historyURL": "https://zenodo.org/records/4039772", "materials": [ { "name": "auf-dem-forum-poster-fregellae.pdf", "url": "https://zenodo.org/api/records/14030792/files/auf-dem-forum-poster-fregellae.pdf/content", "checksum": "md5:15eafb147f6020937c3b3808c491999f" }, { "name": "auf-dem-forum-poster-fregellae.tar.gz", "url": "https://zenodo.org/api/records/14030792/files/auf-dem-forum-poster-fregellae.tar.gz/content", "checksum": "md5:1579cda88eee9c39cedd44cffeea572f" } ], "relations": [ { "identifier": "10.5281/zenodo.2548873", "relation": "isDerivedFrom", "resource_type": "publication-dissertation", "scheme": "doi" }, { "identifier": "10.5281/zenodo.4039755", "relation": "continues", "scheme": "doi" } ], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/14030792", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:3e428de8ec3b96c69f", "topic:archaeology", "topic:keyword:eba76cc1f189bb2a29", "topic:keyword:d3b882bbf1b43796b0" ], "currentRelease": null, "year": "2024", "citation": "Lukas C. 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Two typos regarding taxonomy have been corrected as well: Maccoya intestinihominis has been corrected to Maccoyia intestinihominis and Faecousia faecis to Faecousia intestinalis .", "originalKeywords": [ "bacterial genome", "human intestine", "gut microbiome", "bacteria", "anaerobe" ], "venue": "", "journal": null, "imprint": null, "license": { "id": "cc-by-4.0" }, "source": "https://zenodo.org/records/12755497", "versionsURL": "https://zenodo.org/api/records/12755497/versions", "historyURL": "https://zenodo.org/records/7966738", "materials": [ { "name": "HiBC_Genome_sequences_20240717.zip", "url": "https://zenodo.org/api/records/12755497/files/HiBC_Genome_sequences_20240717.zip/content", "checksum": "md5:2eba6a43865a4bd39b617cb77631669a" } ], "relations": [ { "identifier": "10.5281/zenodo.12180259", "relation": "isSupplementedBy", "resource_type": "dataset", "scheme": "doi" }, { "identifier": "10.5281/zenodo.14592301", "relation": "isSupplementedBy", "resource_type": "dataset", "scheme": "doi" }, { "identifier": "10.5281/zenodo.12187897", "relation": "hasPart", "resource_type": "dataset", "scheme": "doi" }, { "identifier": "https://hibc.rwth-aachen.de/", "relation": "isContinuedBy", "resource_type": "other", "scheme": "url" }, { "identifier": "10.1101/2024.06.20.599854", "relation": "isPublishedIn", "resource_type": "publication-preprint", "scheme": "doi" }, { "identifier": "10.1038/s41467-025-59229-9", "relation": "isPublishedIn", "resource_type": "publication-article", "scheme": "doi" } ], "participation": "authorship", "provenance": { "class": "imported", "url": "https://zenodo.org/api/records/12755497", "field": "metadata", "retrievedAt": "2026-11-08T21:08:36.495Z", "schemaVersion": 1, "importerVersion": 1 }, "legacy": [], "topics": [ "topic:keyword:66bf2331bff3f647c1", "topic:keyword:a77785a561562286fd", "topic:keyword:20beb47f8747bbd631", "topic:keyword:2ca82203124aaaaf3e", "topic:keyword:c0ed7c264942954046" ], "currentRelease": null, "year": "2024", "citation": "Hitch, Thomas C. 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Immer mehr Forschende integrieren die Nutzung eines elektronischen Laborbuchs (ELB) in den Forschungsalltag und dokumentieren ihre Forschung mit diesem Tool digital. Durch die Nutzung eines ELBs ergibt sich eine Reihe von Vorteilen: Forschungsdaten werden langfristig nachvollziehbar beschrieben, Medienbrüche werden minimiert und das Teilen der Forschungsdaten wird erleichtert. Die Einführung und der dauerhafte Betrieb eines ELBs in einer Arbeitsgruppe oder an einer Forschungseinrichtung geht jedoch mit einer Reihe von Herausforderungen einher. Oftmals obliegt es den Infrastruktureinrichtungen, also den Rechenzentren und Bibliotheken, diesen zentralen Dienst für die Forschenden anzubieten. Häufig bieten sich hier Möglichkeiten zur engen Zusammenarbeit dieser Einrichtungen, um den Forschenden eine reibungslose Nutzung dieses Dienstes zu ermöglichen. Der vorliegende Artikel basiert auf dem 6. 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Bossert", "affiliation": "Humboldt-Universität zu Berlin", "orcid": "0000-0003-3076-3968" } ], "contributors": [], "date": "2019-03-21", "datePrecision": "day", "event": null, "doi": "10.5281/zenodo.2548873", "conceptDOI": "10.5281/zenodo.2548872", "version": "1.0.0", "keywords": [ "Reconstruction", "Temporal architecture", "Pits", "Forum", "Italy", "Late Republic", "ancient cities", "public spaces", "roman urbanism", "classical_archaeology" ], "description": "Public, social life in the ancient city culminated on the forum: that this was facilitated by a pragmatic appropriation of the built architectural space surrounding the forum forms the underlying foundation of this thesis. This socio-cultural function of forum architecture is analyzed for (selected) cities of the Italian peninsula of the Late Republic and Early Imperial period. The focus is on the utilitarian dimension of the built structures of the public space – that is, how the architectural configuration of fora influenced the parameters of its use. The main archaeological evidence for the construction of temporary structures is provided by the discovery of series of systematically positioned pits on Italian fora. Here, the pits are classified and used as the foundation for structural calculations in order to reconstruct the various architectural possibilities as 3D models. Probable temporary constructions are reconstructed based on the evidence of pits for the fora of Paestum, Cosa and Alba Fucens. On each of these fora, the reconstruction of 'electoral bridges' (pontes), landings and stands are possible. The impact on the sensory perception of these spaces as a result of the temporary wooden structures thus obtained are then analyzed, with a focus on movement, acoustics, sound, and climate. The acoustic and visual perception for those spaces where temporary structures can be reconstructed is improved in comparison with the permanent structures. The forum itself is thus characterized by differing strategies of use. These strategies continued to be in use over a long period and, with time, the experience gained led to structural improvements of the temporary constructions. Changes to the pits can be correlated to social (and not necessarily political) reorganizations, whereby new buildings began to assume the functions of the fora. 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